Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00694 ATGATGGTGTTTAAGTCGCAAAAGGCTGATTCCACTCTTCTACTTGCAGCATCATGGCGATTTCTCTACATATTCCTGTTCAGCGTATTTGTAATGTTTTCTTTCTCTGTTGCTATTGAGGAAGCAAATGGTCTATTAAAGTGGAAAGCAAGCCTTACAAACCAAAGCCAAGCTAACTTGTCTTCTTGGATTGGCACTCATCCTTGCACCAACTGGAATGGAATTACTTGCGATGAATCCATGCACGTGTCCACCATAAATCTCACTGGTCTGGAGTTACAAGGTACACTTCACAATCTCAACTTCTCATCCTTCCCTAAACTGCAAGTTTTGGATATAAGTTCCAACCAGTTTTCTGGAAGTATTCCTAGCCAGATTGGCAACTTGTCCAGTATTTCTAAATTGTATATGTTTCATAATTTCTTGAGTGGTTTCATCCCTCCAGAAATAGGAAAGCTGACTACTCTAAATGAGCTTGCAATTCATTCAAATAAGCTTAACGGGCGAATTCCCAAAGACATTGGAAAGTTGAGGAATTTGAGAATATTATCACTTTACACAAATAATCTGACTGGTCTCATTCCTCAAGAAATTGGAATGCTGAGCAATCTCGAAGAATTATACTTGTTTGAAAACACTTTTTTAATTGGAGGAATCCCTTCTTCAATAGGAAACTTGACCAAATTGAAATCACTTTTCCTATATCAAAATAGATTGTCGGGTCTCATTCCTTGGGAATTTCAAAACCTCCATTCTCTCACCGAGTTGGATTTGTCAGAAAATAACTTGGATGGTCCAATACCAAACTTCGTAGGAAACTTCACAAATCTGACTGGGTTAAACTTTAGGGGTAACAAACTTTCTGAGAAAATCCCATCCTCTATAGGAAACTTGGTCAATTTACAAGAGCTCGACATTTCTAAAAACTCTCTTACTGGACCTATTCCATCTACCATAAGAAACCTAACCAAACTAGAAGGTCTTTATCTTTATCAAAATGGATTGTCTGGTCCCATTCCTTCTGAACTTGGGAACTTGTACTCTCTTATCAAATTGGATTTGGACATAAACAACTTGTATGGGCCAATCCCATCCTCCATAGGAAATCTAACCAAACTAGAAAAACTTTTCCTGAAACAAAATAGATTCTGTGGCCCAATACCGCCCTTCATCGGAAACTTGACAAAACTTGTCGCGTTGGATTTGGGGGACAACAGAATTTGGGGATCAATTCCAACCTTTATCAGAAACTTGGTGAATTTACAACTACTCTCCCTTGACAATAACTCACTTTCTGAAACTATTCCAGCTGCTATGGGCAATTTGAAACACCTTAACTCCCTGATTTTAGGACGCAATCAGCTCTACGGGAGCATTCCAATAGAGATAAATAATCTTACCAACTTGAATGAATTACAAATTGGTTGGAATGAGTTGACTGGCCATTTGCCACGACATATTTGCTCTGGTAAGTCACTTAAACATTTGGGTGCTTCTAAAAACAAATTCATTGGTCCAATTCCAAGAACTTTGAAAAATTGTTCTAGCCTTATTAGACTCGTACTTCATGATAACCAATTGGTTGGGAATATAACAAGTGATTTTGGTGTGTATCCATATCTGAAATACATTAATTTGAGTGGAAATAAATTTTATGGCCACATTTCATCATTGTGGGGAAGGTGTCCAAATCTTACAACATTAATCATTTCCAACAACAACATTTCTGGCAATATACCTCCAGAAATAGGAGAGGCAGCCAATCTTGGAGAACTCAATATTTCATCAAATCACTTGACAGGAGAAATTCCAAAAGAATTGGGGAAGATCATCTCACTGACTAGACTCTCTCTGAGTCATAATCAATTTTTAGGAAAGATTCCTATAGAAATAGGATCATTGAATCAACTTGAACAGTTAGAGTTGGCATTAAATAATCTCATTGGCCCAATACCTAAAGATTTTGAAGGCTTGGGCAAGCTATGGCTCTTGAACTTGAGCAGAAATAAATTGGAGGGAAGCATTCCCTTTGAGATTGGTAAGTTAAATGCTTTGCAAGAACTTGATCTTAGTGAAAATATGTTGAGGGGTACAATACCAGCAACACTTGGAACACTAAAGATGCTGGAATATTTAAACCTTTCACATAATAACCTCTGTGGCACCATTCCATCCAATTTCGATGACATGTCAAGCTTGACATCTGTGGACATATCTTACAACCATTTAGAAGGACCTCTTCCTAATATTCCAGGTTTTCGAAATATTACATTTGAGGCAGTGAGGAACAACACAAGTTTATGTGGTAATGTTACGGGATTAGAGCTTTGCGAAAAACATAGAAATAGTCCACAAGGTCATATGAACAAAAAAGCAAAACTATTAGTGTCATTGTTTGCTTGTTTTGTGACTTTGATGCTAGTAGTAGGTGGAGTTTCCTATATTCTGCATCAAAAATCAAATAAAAACAGACAAGCACAAGTTCCAAGTCTTTTCTCAATGGCGCATTTTGATAGTAACACGTTGCATCAAAAGGTTGTTGAGGCTACAGAGAATTTTGATGACAAATATCTTGTTGGGATAGGAGGACAAGGAAGTGTTTACAAGGCTGAGTTACTTCCAAGTCAATTCTTTGCTGTGAAGAAATTTCATTCAAATTCAAATACAAATTTCTCCAATATCAAAGCATATATAAGTGAAATTCAAGCACTAATAGACATCAAACATCATAATGTAGTGAAGCTGCTTGGATATTTTTCGAGCCCGCAAATCTTGTGTTTAGTCTATGAGTTCCTAGAAGGTGATAGCTTGGATAAGATTTTAAAAAGTGAAGAACATGCACCTAAACTTGATTGGGAAAAGAGGGTGAATGTTGTTAGAGGTGTCACTAGTGCATTATTCCATATGCACCATGGTCTCTCATGTCCCATCGTTCATCGTGACATATCAAGTAAAAACATCATGCTAGATCGAGAATATCAAGAAGCTCATATCATTGACTTTGGAATAGCCAAGTTTCTAAAGCTTGACTCGAACAACATGACCTCATTCGTTGGAACCTATGGTTATGCTGCTCCAGAGATTGCTTTTACAATGCAAGCAAATGAGAAATGTGATGTTTACAGTTTTGGTGTTCTCACATTAGAAATTCTAATGGGAAGATTTCCAGGAGAGTTGGTTTGTTCTTTAACAGAGAACACAATATCCTATGATTTGTCACTCAAGGATATGTTGGATCAGCGACTTCCTCCACCCTCAAACTTGGTTGCTGAGGAAGTAATGTTGATTGCAAAAATTGCACTTGATTGCTTGAATAAAAATCATCAGTGCCGACCAACCATGGAACAAATATCTCTGAAACTTGTGAGATCTAAATCTTATTCAGTGAACCAGTTCGAAAATATCACACTTGGACTACTCATGAGCTTAACCTTCTTTGGTAATTAA 3447 0.3716 MMVFKSQKADSTLLLAASWRFLYIFLFSVFVMFSFSVAIEEANGLLKWKASLTNQSQANLSSWIGTHPCTNWNGITCDESMHVSTINLTGLELQGTLHNLNFSSFPKLQVLDISSNQFSGSIPSQIGNLSSISKLYMFHNFLSGFIPPEIGKLTTLNELAIHSNKLNGRIPKDIGKLRNLRILSLYTNNLTGLIPQEIGMLSNLEELYLFENTFLIGGIPSSIGNLTKLKSLFLYQNRLSGLIPWEFQNLHSLTELDLSENNLDGPIPNFVGNFTNLTGLNFRGNKLSEKIPSSIGNLVNLQELDISKNSLTGPIPSTIRNLTKLEGLYLYQNGLSGPIPSELGNLYSLIKLDLDINNLYGPIPSSIGNLTKLEKLFLKQNRFCGPIPPFIGNLTKLVALDLGDNRIWGSIPTFIRNLVNLQLLSLDNNSLSETIPAAMGNLKHLNSLILGRNQLYGSIPIEINNLTNLNELQIGWNELTGHLPRHICSGKSLKHLGASKNKFIGPIPRTLKNCSSLIRLVLHDNQLVGNITSDFGVYPYLKYINLSGNKFYGHISSLWGRCPNLTTLIISNNNISGNIPPEIGEAANLGELNISSNHLTGEIPKELGKIISLTRLSLSHNQFLGKIPIEIGSLNQLEQLELALNNLIGPIPKDFEGLGKLWLLNLSRNKLEGSIPFEIGKLNALQELDLSENMLRGTIPATLGTLKMLEYLNLSHNNLCGTIPSNFDDMSSLTSVDISYNHLEGPLPNIPGFRNITFEAVRNNTSLCGNVTGLELCEKHRNSPQGHMNKKAKLLVSLFACFVTLMLVVGGVSYILHQKSNKNRQAQVPSLFSMAHFDSNTLHQKVVEATENFDDKYLVGIGGQGSVYKAELLPSQFFAVKKFHSNSNTNFSNIKAYISEIQALIDIKHHNVVKLLGYFSSPQILCLVYEFLEGDSLDKILKSEEHAPKLDWEKRVNVVRGVTSALFHMHHGLSCPIVHRDISSKNIMLDREYQEAHIIDFGIAKFLKLDSNNMTSFVGTYGYAAPEIAFTMQANEKCDVYSFGVLTLEILMGRFPGELVCSLTENTISYDLSLKDMLDQRLPPPSNLVAEEVMLIAKIALDCLNKNHQCRPTMEQISLKLVRSKSYSVNQFENITLGLLMSLTFFGN 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00694 1148 Pfam Leucine rich repeat N-terminal domain 40 78 IPR013210 -
Accr1g00694 1148 SMART serkin_6 853 1128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00694 1148 Pfam Leucine rich repeat 684 743 IPR001611 GO:0005515
Accr1g00694 1148 Pfam Leucine rich repeat 221 263 IPR001611 GO:0005515
Accr1g00694 1148 Pfam Leucine rich repeat 612 671 IPR001611 GO:0005515
Accr1g00694 1148 Pfam Leucine rich repeat 396 455 IPR001611 GO:0005515
Accr1g00694 1148 Gene3D Ribonuclease Inhibitor 38 212 IPR032675 -
Accr1g00694 1148 SMART LRR_typ_2 105 129 IPR003591 -
Accr1g00694 1148 SMART LRR_typ_2 394 417 IPR003591 -
Accr1g00694 1148 SMART LRR_typ_2 658 682 IPR003591 -
Accr1g00694 1148 SMART LRR_typ_2 706 729 IPR003591 -
Accr1g00694 1148 SMART LRR_typ_2 322 346 IPR003591 -
Accr1g00694 1148 SMART LRR_typ_2 466 490 IPR003591 -
Accr1g00694 1148 SMART LRR_typ_2 298 321 IPR003591 -
Accr1g00694 1148 SMART LRR_typ_2 250 274 IPR003591 -
Accr1g00694 1148 SMART LRR_typ_2 562 586 IPR003591 -
Accr1g00694 1148 SMART LRR_typ_2 418 442 IPR003591 -
Accr1g00694 1148 SMART LRR_typ_2 610 634 IPR003591 -
Accr1g00694 1148 SMART LRR_typ_2 177 200 IPR003591 -
Accr1g00694 1148 SMART LRR_typ_2 226 249 IPR003591 -
Accr1g00694 1148 SMART LRR_sd22_2 634 660 - -
Accr1g00694 1148 SMART LRR_sd22_2 226 247 - -
Accr1g00694 1148 SMART LRR_sd22_2 177 206 - -
Accr1g00694 1148 SMART LRR_sd22_2 706 729 - -
Accr1g00694 1148 SMART LRR_sd22_2 394 420 - -
Accr1g00694 1148 SMART LRR_sd22_2 298 324 - -
Accr1g00694 1148 SMART LRR_sd22_2 250 282 - -
Accr1g00694 1148 SMART LRR_sd22_2 105 131 - -
Accr1g00694 1148 Pfam Leucine Rich Repeat 300 322 IPR001611 GO:0005515
Accr1g00694 1148 PRINTS Leucine-rich repeat signature 706 719 - -
Accr1g00694 1148 PRINTS Leucine-rich repeat signature 685 698 - -
Accr1g00694 1148 SUPERFAMILY Protein kinase-like (PK-like) 844 1119 IPR011009 -
Accr1g00694 1148 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 466 781 - -
Accr1g00694 1148 Pfam Protein kinase domain 856 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00694 1148 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 516 1122 - -
Accr1g00694 1148 FunFam Leucine-rich repeat receptor-like protein kinase 932 1131 - -
Accr1g00694 1148 SUPERFAMILY L domain-like 45 316 - -
Accr1g00694 1148 FunFam Leucine-rich repeat receptor protein kinase MSP1 816 931 - -
Accr1g00694 1148 SUPERFAMILY L domain-like 612 768 - -
Accr1g00694 1148 ProSiteProfiles Protein kinase domain profile. 853 1128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00694 1148 ProSitePatterns Tyrosine protein kinases specific active-site signature. 977 989 IPR008266 GO:0004672|GO:0006468
Accr1g00694 1148 FunFam Nuclear pore complex protein NUP107 38 196 - -
Accr1g00694 1148 Gene3D Ribonuclease Inhibitor 327 488 IPR032675 -
Accr1g00694 1148 Gene3D Ribonuclease Inhibitor 489 779 IPR032675 -
Accr1g00694 1148 Gene3D Ribonuclease Inhibitor 213 326 IPR032675 -
Accr1g00694 1148 SUPERFAMILY RNI-like 313 624 - -
Accr1g00694 1148 FunFam Leucine-rich repeat receptor protein kinase EMS1 341 438 - -
Accr1g00694 1148 Gene3D Phosphorylase Kinase; domain 1 833 931 - -
Accr1g00694 1148 FunFam Leucine-rich repeat receptor protein kinase EMS1 243 340 - -
Accr1g00694 1148 Gene3D Transferase(Phosphotransferase) domain 1 932 1136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00694 Accr-Chr1 13523558 13527096 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00694 514 749 Receptor kinase-like Gene Family AT4G08850 38.783 1.59e-40 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr1g00694 Pkinase 6.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00694 - - pcin:129317259 1147.11