Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00675 ATGGATCAAAACCACCATGATCTAGCAGCAGCAGGAGGAATGTCTGGTGCTTCAGCTCAAGGAGCATATGGAATGAATCAATATCAATCTAACCCAATGATGGCTGCTCCTCAACCTCAGTCTCCTTCTCAGGCGGCATCAGGTCTTCCGGCATCATCTTCTTCCTACCTGAGAGAGCAACAATATACTCACCAGTACATGCATCAGCTTCAGCAACAAGAGCTGCGGCAACAACTCCAGAACTTTTGGGCCAACCAGTACCATGAGATTGAGCAGATTGTTGATTTCAAGAACCATAGCTTGCCTTTAGCTCGGATCAAGAAGATCATGAAGGCTGATGAGGATGTGAGGATGATATCAGCTGAGGCCCCAGTTATATTTGCCAGGGCCTGTGAGATGTTCATCCTGGAGCTAACACTCAGGTCGTGGATCAGCGCAGAGGAGAACAAGAGGAGGACACTTCAGAAGAATGACATTGCAGCAGCAATCACAAAGACTGATGTGTTTGATTTCCTGGTTGATATTGTGCCAAGAGATGACTTGAAGGATGATTTGCTCTCAGGTGTTCCTAGAGTCCCACCACCACCACCAGCAGAGAATGTTCCTTACTACTACATCCCACCTCAGCAAGTTGTGGGCCCTCCTCATTCTCCATATGGAGCTCCAAAAGTGATCATGGGTAGGCCTGTTGTTGATCAAGCTCATTATGGTCAGCCATCAGCGCACCCTTCTTTCTCTGCACAAGTGTGGCCACACCAGCAAAACCCATCCAACAACAACTCAGATTCTTGA 792 0.4773 MDQNHHDLAAAGGMSGASAQGAYGMNQYQSNPMMAAPQPQSPSQAASGLPASSSSYLREQQYTHQYMHQLQQQELRQQLQNFWANQYHEIEQIVDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWISAEENKRRTLQKNDIAAAITKTDVFDFLVDIVPRDDLKDDLLSGVPRVPPPPPAENVPYYYIPPQQVVGPPHSPYGAPKVIMGRPVVDQAHYGQPSAHPSFSAQVWPHQQNPSNNNSDS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00675 263 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 51 202 - -
Accr1g00675 263 MobiDBLite consensus disorder prediction 239 263 - -
Accr1g00675 263 MobiDBLite consensus disorder prediction 30 54 - -
Accr1g00675 263 SUPERFAMILY Histone-fold 72 172 IPR009072 GO:0046982
Accr1g00675 263 MobiDBLite consensus disorder prediction 234 263 - -
Accr1g00675 263 FunFam Nuclear transcription factor Y subunit gamma 65 178 - -
Accr1g00675 263 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 100 163 IPR003958 -
Accr1g00675 263 Gene3D Histone, subunit A 62 178 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00675 Accr-Chr1 13245318 13246109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00675 1 229 CCAAT-HAP5 Transcription Factor Family AT1G08970 57.391 2.26e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Accr1g00675 CBFD_NFYB_HMF 2.9e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00675 K08066 - qsa:O6P43_021613 282.722