Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00672 ATGGGCTTTGTGCAGCTATATCCAATCTTGTTGTCCCTCTTATTTGCCTTGTTTTCACTTTCTGTACTTGCTCAAACTACCAGTAATATCACTCTAGGAACTTCTCTTACTGCTGGAGAAGATGACTCTTTCAGGGCTTCACCATCTGGTGAATTTGCATTTGGGTTCAAACAAATTGAGGAAGATGGCTTTTTACTGGCAACCTGGTTTCATAGCATATCAGAAGAAACTATTGTTTGGTCAGCCAATGGTCAAAATCTTGCACCAAAGGGTTCTAAAGTTGAGCTCACCTCAAATGGTTGGTTCCAACTTGTTGATCCTAATGGTAAGCAAATTTGGAATGCAAGCTCTTCAAGAACTGGATTAGTTGCTTACGCAACCATGCTTGATTCTGGTAACTTTGTGTTACGTGGACAAAACTCTCAAAATTTGTGGCAAAGCTTTGAGCAACCTACAGACACAATTTTACCAGGGCAGGTTCTAAATCAACCAGCTCGACTTGTTGCACGCTATTTGCCAACCAACTATTCAAGAGGAAGATTTCAGTTGAATCTAACAGATGATGGGAATCTTGAGCTTTGCAAAACCTTCTTTCCAACAGATCTTGTGAATTCTGCTTATTGGGAAACTAATACTTCTGGCACTGGCTTCTCTTTGATCTTCAATCTCTCTGGCTCTATAATTTTACGTGCAGATAATGGAACTATCATTAGTCCAATATTATCAAACATTCTGTATTCTACAAAAAATTTCTACCAAAGAGCTGTTCTTGATTATGATGGTGTATTTAGGCACTATATCTACCCAAAGAATAGTGGCTCTAGCATTGGAAGTTGGTCAACTTTCTCTATCGCACCTCCAAATATTTGTTTGAATATTCGTGAAGAGATGGGAAGTGGAGCTTGTGGTTTCAACAGCTATTGTAAATTTAATGGGACCAATAAAAGTTGCCAGTGTCCAAACGGTTATAGCTTTATTGATCCAAGTGATGTGATGAAAGGTTGCAAACGGGACTTCGTTTCACAAAGTTGTGATCAAACTTCCAGAGAAACGGAACTCTTTGATTTCCATGAGATTCCCAATATGGATTGGCCATTTTCTGACTATGAATACTTTCATTTGGTGTTTGAGGATTGGTGCAAACAAGAGTGCTTGGCAGATTGCTTTTGTTCTGCTGTTATCTTCAGAGATGGCGAATGCTGGAAGAAGAGACAACCTCTCTCTAACGGAAGATTGGATCCTTCTTTAGGGGGAAAAGCCTTGATCAAAATAAGGAAGGACAATGCTACTTTGATTTTAGAGGATTGCAATAGAGACAATGATCGATCTAAGTTGATCATCATAGGTTCCACACTCCTAAGCGGTTCAGTTTTCTTTAACTTGGTTTTGTTGGTAGCAACTTGTCTAGTTGCATATCGATGTGGTCGCAGTAATCCTAAAGGTGATCAAGCTGTCCAATTAACATCAACCATGAACCTTAGAAGTTTCACTTATGAAGAGCTTAGGAAAGGAACAAAAGGGTTCACCGAAGAACTTGGTCGTGGTGCATTTTCTGTTGTTTACAAAGGTTTTATATCTGACACACCAGGGAATCTCATTGCTGTGAAAAAATTGAATATGGTGAAAGGAAGCGAGAAGGAATTTGAAGCAGAAGTGAGTGCAATTGGTCGAACACATCATAGGAATCTCGTGCAACTATTGGGATTTTGCAATGAAGGAGAGGATAGGCTACTTGTGTATGAATTCATGAGTAGGGGAACTTTAGCCAAGTTTCTTTTCAAAGATCAAAGGCCAACTTGGCATCAAAGGGTGGACATAACAATAGGAATAGCCAAAGGACTCTTGTACTTGCATGAAGAATGTAGCACTCAGATCATCCACTGTGATATCAAGCCTCAGAATATCCTGCTCGATGATTCTAACACCGCCAAGATATCAGATTTTGGTTTAGCAAAACTATTGAAGATTGACCAAACTGTAACTACAACAGCAATTAGAGGAACTAAAGGGTATGTTGCAGCTGAGTGGTTCAAAAACAAACCAATTACGATGAAGGTTGATGTTTACAGCTTTGGAGTATTGTTGTTGGAGGTGATTTGTTGCAGAAAGAACTTTGATGTGAATGTTGAAGATGAGGACAGGATTGTATTAATAGATTGGGCATATGACTGCTTTCACCATAGGAGATTGGACTTGTTAGTGGAAGATGATGAGGAAGCTCAAACTAACATGAAGCAGATGGAAGAGTATGTCAAGATAGGTATATGGTGTATTCAAGAGGATCCATCCGCAAGACCCACTATGAAGCAAGTTGTACAAATGCTTGAAGGATTCATGGATGTCTCAAATCCCCCCTATCTATCATCCTTTACTAGTTAA 2379 0.3934 MGFVQLYPILLSLLFALFSLSVLAQTTSNITLGTSLTAGEDDSFRASPSGEFAFGFKQIEEDGFLLATWFHSISEETIVWSANGQNLAPKGSKVELTSNGWFQLVDPNGKQIWNASSSRTGLVAYATMLDSGNFVLRGQNSQNLWQSFEQPTDTILPGQVLNQPARLVARYLPTNYSRGRFQLNLTDDGNLELCKTFFPTDLVNSAYWETNTSGTGFSLIFNLSGSIILRADNGTIISPILSNILYSTKNFYQRAVLDYDGVFRHYIYPKNSGSSIGSWSTFSIAPPNICLNIREEMGSGACGFNSYCKFNGTNKSCQCPNGYSFIDPSDVMKGCKRDFVSQSCDQTSRETELFDFHEIPNMDWPFSDYEYFHLVFEDWCKQECLADCFCSAVIFRDGECWKKRQPLSNGRLDPSLGGKALIKIRKDNATLILEDCNRDNDRSKLIIIGSTLLSGSVFFNLVLLVATCLVAYRCGRSNPKGDQAVQLTSTMNLRSFTYEELRKGTKGFTEELGRGAFSVVYKGFISDTPGNLIAVKKLNMVKGSEKEFEAEVSAIGRTHHRNLVQLLGFCNEGEDRLLVYEFMSRGTLAKFLFKDQRPTWHQRVDITIGIAKGLLYLHEECSTQIIHCDIKPQNILLDDSNTAKISDFGLAKLLKIDQTVTTTAIRGTKGYVAAEWFKNKPITMKVDVYSFGVLLLEVICCRKNFDVNVEDEDRIVLIDWAYDCFHHRRLDLLVEDDEEAQTNMKQMEEYVKIGIWCIQEDPSARPTMKQVVQMLEGFMDVSNPPYLSSFTS 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00672 792 Gene3D - 21 149 IPR036426 -
Accr1g00672 792 FunFam S-receptor-like serine/threonine-protein kinase 476 582 - -
Accr1g00672 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 212 IPR036426 -
Accr1g00672 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Accr1g00672 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 24 149 - -
Accr1g00672 792 SMART blect_4 35 151 IPR001480 -
Accr1g00672 792 PIRSF SRK 2 792 IPR024171 GO:0004674
Accr1g00672 792 Pfam Protein kinase domain 510 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00672 792 Gene3D Transferase(Phosphotransferase) domain 1 583 786 - -
Accr1g00672 792 CDD PAN_AP_plant 340 424 - -
Accr1g00672 792 ProSiteProfiles Protein kinase domain profile. 506 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00672 792 FunFam Serine/threonine-protein kinase 152 293 - -
Accr1g00672 792 ProSitePatterns Protein kinases ATP-binding region signature. 512 537 IPR017441 GO:0005524
Accr1g00672 792 Gene3D Phosphorylase Kinase; domain 1 472 582 - -
Accr1g00672 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 783 - -
Accr1g00672 792 CDD B_lectin 47 151 IPR001480 -
Accr1g00672 792 SUPERFAMILY Protein kinase-like (PK-like) 483 776 IPR011009 -
Accr1g00672 792 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 36 787 - -
Accr1g00672 792 CDD STKc_IRAK 512 778 - -
Accr1g00672 792 Gene3D - 152 281 IPR036426 -
Accr1g00672 792 SMART serkin_6 506 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00672 792 Pfam D-mannose binding lectin 77 161 IPR001480 -
Accr1g00672 792 ProSiteProfiles Bulb-type lectin domain profile. 27 149 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00672 Accr-Chr1 13146408 13148786 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00672 446 791 Receptor kinase-like Gene Family AT1G56120 40.563 2.52e-69 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr1g00672 Pkinase 2.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00672 - - aip:107638596 980.704