Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00662 ATGCTTGATTCTGGTAACTTTGTGTTTCTTGGACAAGACTCTCAAAATTTGTGGCAGAGCTTTGAGCAACCCATTGACACAATTTTACTGGGACAAGTTCTAAATCAACCAGCTGAACTTGTTGCACGCTATTTGCCAACCAACTATTCAAGAGGAAGATTTCAGTTGAATCTACAATATGATGGGAATCTCGTGCTTTCCACAACCTTCTTTCCAACAGATCTTGTGAATTCTGTTTATTGGAGTACTCAAGCTTTTGGTACTGGCTTCTCTTTAATCTTCAATCTACCTGGCTATATAATTTTACGTGCACATAATGGAACTATCATTAGTACAATATCATCAAATACTCTATATTCTACACAAGATTTCTACCAAAGAGCTATTCTTGATTATGATGGTGGATTTAGGCACTATAACTACCCCAAGAATAGTGGCTCTAGAACTAGAAGTTGGCCAACTTTCTCTGTCACACCTTCAAATATTTGTTTACATGTTGGTGAACAAATGGGAAGTGGAGCTTGTGGTTTCAATAGCTATTGTATATTTGATGGGACCAATAAAAGTTGCCAGTGTCCAAATGGTTATAGCTTCATTGATCCAAGTGATGGGGTGAAAGGTTGCAAACAGGACTATGTTTCACAAAGTTGTGATCAAACTTCCAAAGAAATAGATCTCTTTGATTTCCACGAGATGCCCAATATGGATTGGCCATTTTCTGACTATGAACACTTTCAATCAGTGTCTGAGGATTGGTGCAAACAAGAGTGCTTGGCAGATTGCTTTTGTTTTGCTATTATCTACAAAGATGGCGAATGCTGGAAGAAGAGACAACCTCTCTCTAATGGAAGAATGGATCCTTCTTTAGGAGTAAAAGCTTTGATCAAAACAAGAAAGGACAATGCTACTCTGATTCTCAAGGATATCAATAGAGACAATGATCGATCAAAGTTGATCATCATAGGTTCCACACTCCTAAGCAGTTCAGTTTTCTTTAATTTGGTTTTGTTGGTGGTAGCTTGTCTGGTTGCATATCAATGTCGCCGCAGTAATCCTAAAGGTGATCAATCTGTCCAATTAACATCAACCACAAACCTTAGAAGTTTCACTTATGAAGAGCTTAGTAAAGGAACAAAAGGGTTCACGGAAGAACTTGGTCATGGTGCATTTTCTATTGTTTACAAAGGTTTTCTACCTGACACACCAGGGAATCTCATTGCTATGAGAAAATTGAATATGGTGAAAGGAAGCGAGAAGGACTTTGAAGTAGAAGTGAGTGCGATTGGTCGAACACATCATAGGAATCTTGTGCAATTGTTGGGATTCTGCAATGAAGGAGAGGATAGGCTACTTGTGTATGAATTCATGAGTAGGGGAACTTTAGCCAAGTTTCTTTTCAAAGATCCAAGGCCATCTTGGCATCAAAGGGTGGACATAGCAATAGGAATAGCCAAAGGACTCTTGTACTTGCACGAAGAATGTAGCACTCAAATCATCGATTGTGATATCAAGCCTTAG 1518 0.3867 MLDSGNFVFLGQDSQNLWQSFEQPIDTILLGQVLNQPAELVARYLPTNYSRGRFQLNLQYDGNLVLSTTFFPTDLVNSVYWSTQAFGTGFSLIFNLPGYIILRAHNGTIISTISSNTLYSTQDFYQRAILDYDGGFRHYNYPKNSGSRTRSWPTFSVTPSNICLHVGEQMGSGACGFNSYCIFDGTNKSCQCPNGYSFIDPSDGVKGCKQDYVSQSCDQTSKEIDLFDFHEMPNMDWPFSDYEHFQSVSEDWCKQECLADCFCFAIIYKDGECWKKRQPLSNGRMDPSLGVKALIKTRKDNATLILKDINRDNDRSKLIIIGSTLLSSSVFFNLVLLVVACLVAYQCRRSNPKGDQSVQLTSTTNLRSFTYEELSKGTKGFTEELGHGAFSIVYKGFLPDTPGNLIAMRKLNMVKGSEKDFEVEVSAIGRTHHRNLVQLLGFCNEGEDRLLVYEFMSRGTLAKFLFKDPRPSWHQRVDIAIGIAKGLLYLHEECSTQIIDCDIKP 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00662 505 Gene3D Phosphorylase Kinase; domain 1 340 455 - -
Accr1g00662 505 Pfam PAN-like domain 229 279 IPR003609 -
Accr1g00662 505 Pfam Protein tyrosine and serine/threonine kinase 381 493 IPR001245 GO:0004672|GO:0006468
Accr1g00662 505 SUPERFAMILY Protein kinase-like (PK-like) 355 505 IPR011009 -
Accr1g00662 505 Gene3D Transferase(Phosphotransferase) domain 1 456 505 - -
Accr1g00662 505 ProSiteProfiles Protein kinase domain profile. 379 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00662 505 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 505 - -
Accr1g00662 505 FunFam S-receptor-like serine/threonine-protein kinase 348 455 - -
Accr1g00662 505 Gene3D - 25 151 IPR036426 -
Accr1g00662 505 SUPERFAMILY alpha-D-mannose-specific plant lectins 1 84 IPR036426 -
Accr1g00662 505 CDD PAN_AP_plant 213 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00662 Accr-Chr1 12802040 12803557 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00662 328 505 Receptor kinase-like Gene Family AT4G18250 36.813 9.06e-33 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr1g00662 PK_Tyr_Ser-Thr 6.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00662 - - aip:107638596 585.874