Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00657 ATGGCGAGAAAGTGCTCGAATTGTGGGAAAATAGGGCATAATTCTAGGACTTGCACATCTTTCAGAGGAACTTGTGTAGGTCTTCGTCTCTTTGGTCTTCAGCTAGAAACTTGTTCTGTTTCTTCTTGTATTTTCGACATGAAGAAAAGCTTGAGCATGGATTCTTTACCAGCTTCTTCATTGTCATCTTCTCCATCCTCATCATTAAACTCTGCAGAGAAATCCTCTATTGAGTATCTATCAGATGGTCTAATAGATGTTGATGCAGCACAAGACAGAAGAAAAGGAGTAGCTTGGACAGAAGAAGAACACAGAAGATTCCTCTTTGGGCTTGAGAAGTTAGGAAAAGGAGATTGGAGAGGAATCTCCAGAAATTATGTCACAACAAGAACACCTACTCAAGTAGCTAGTCATGCTCAGAAATATTTTCTGCGAGTCGCAGCCGTCAATAAGAAGAGACGATCAAGCCTCTTTGAGTTGGTGGGTCTACAGGAGGATGTTAAATCTGGAAGCTATAAGTGTGAGGATAAGCAGAATGATACTAGCTTGACATTGACGGGCCTAAGCTTGTTTGGAAAGGGAATTAAATCTGAAGTAATTGTGCCGACGTGGCAGCATAGTAATTCCCAGCTGATGAAATCTTCTTCACCAACAATGCCTGATCTGGAGCTCACACTTGCAGGACCCAAGTCCTAG 696 0.421 MARKCSNCGKIGHNSRTCTSFRGTCVGLRLFGLQLETCSVSSCIFDMKKSLSMDSLPASSLSSSPSSSLNSAEKSSIEYLSDGLIDVDAAQDRRKGVAWTEEEHRRFLFGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRVAAVNKKRRSSLFELVGLQEDVKSGSYKCEDKQNDTSLTLTGLSLFGKGIKSEVIVPTWQHSNSQLMKSSSPTMPDLELTLAGPKS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00657 231 MobiDBLite consensus disorder prediction 210 231 - -
Accr1g00657 231 FunFam transcription factor MYB1R1 97 148 - -
Accr1g00657 231 SMART sant 95 145 IPR001005 -
Accr1g00657 231 SMART c2hcfinal6 4 20 IPR001878 GO:0003676|GO:0008270
Accr1g00657 231 PANTHER TRANSCRIPTION FACTOR KUA1 3 176 - -
Accr1g00657 231 Pfam Myb-like DNA-binding domain 98 143 IPR001005 -
Accr1g00657 231 CDD SANT 98 143 IPR001005 -
Accr1g00657 231 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Accr1g00657 231 ProSiteProfiles SANT domain profile. 99 147 IPR017884 -
Accr1g00657 231 ProSiteProfiles Myb-like domain profile. 91 143 IPR001005 -
Accr1g00657 231 NCBIfam myb-like DNA-binding domain, SHAQKYF class 95 145 IPR006447 GO:0003677
Accr1g00657 231 Gene3D - 97 149 - -
Accr1g00657 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 147 IPR017930 -
Accr1g00657 231 SUPERFAMILY Homeodomain-like 93 146 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00657 Accr-Chr1 12699122 12700101 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr1g00657 Myb_DNA-binding 2.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00657 - - pcin:129293374 261.922