Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00654 ATGGCTTTGGAGAAGCCATATCCAATCTTCTTGTCTCTCTTACTCGCCTTGCTTTTGCACTCTGTAGTTGCTCAACCTTCCAAGAATAATATAATATCCTTGGGCACTTCCCTCACAGCAGTTGAAAATGGCTCCTTCTGGCCTTCACCATCTGGTGATTTTGCATTTGGTTTCAGAAAAATTGAGAAAGAAGATGGTTTCTTGCTAGCCATCTGGTTCAACAAAATTCCAGACAAAACTATCGTCTGGTCAGCCGTGCTTGAGACGACGGGCGATGCACTTGTTGCACCAAACGGTTCCAAAGTTGAGCTCAAATCAGATGGTTTGTTCCAGCTTGTTGATCCCGAAGGTGATCAGATTTGGATTGCTAGCCCTTCTAGAAATGGCACTGATCATGCTGCTATGCTTGATACTGGTAACTTTGTGCTGGTTGGTCATGAATCTCAAAATTTGTGGCAGAGCTTTGATCATCCCTCTGATACAATTTTACCAGGACAGGTTTTGCATTCCCCTGCTCAACTTGTTTCGCGCTATTCTCAAAATAATTTTTCCAGGGGGAAATTTCTGTTAAGACTCCAAGATGATGGGAATCTTGTTCTTTGGACAACCCATTATCCAATGACATTAGCAAATATTCCTTATTGGGATTCCCATGTTTTTGGTGATGGCTTCTCGTTGGTCTTCAACCAAACAGGCTCTATATTTGTTCAGAGCAGTAACAAGAGTATGGTCGCGAGTATATCATCAAATGCTCCATCTACACAAGATTTCTATCAGAGGGCTATTATTGATTATGATGGAGTTTTTAAGCGCTATACCTATCCCAAGGGTCATAGTTCCAGTGCATGGTCAGTTAGTCACAACATACCGGAAGATATCTGCAACAAAATTGTTGAATATACAGGAAGTGGAGCTTGTGGATTCAACAGCTACTGTATCTTTGATGATGGGATGAAAAGCTGCCGTTGCCCAGATGGTTATAGCTTTGTTGATCCAAATGATGTGAAGAAAGGGTGTAAGCAAAACTTTGTTCCACAAAGTTGTGATGAAACCTCTTCAGAAGCACATCACTTTAATTTCTCTGAGATGCAATACACACATTTTCCAAGTTCTTACTATGATTACTTCTATCAAGTAAGTGAGGATTGGTGTAAACAAGTTTGTTTAGATGATTGTCATTGTGCAGTTGCTGTTTTCAGAGCGGGGGAATGTTGGAAGGAGAACCTGCCTCTCAAAAATGGTTTGATTGATACACCATTCGGAGGGAAAGCTTTTTTTAAAATAAGAAAAGTTGATTCTTCTGCTTTGGATCCTGAAAATGTTCATGTTAAGAACCATATATCTAAATTGATTGTTATTGGTTCAACATTTTTAGGAAGTTCAGTATTCTTGAACTTGCTCTTATTAGTGGCACGTTCAAAATTGGTGGTATATTGGTCTGGCCACAATAATCAAGAGGATCCCAAAACTAGTCCATCTAGGCCAAGAATGAATCTTAGAAGTTTCACTTATGATGAGTTAGTGGAAGGAACAAATGGGTTCACAGAAGAATTGGGACGTGGTGCATTTTCTACTGTTTACAAAGGTGTTCTACCTGACATTCCAGGGAACCTCGTTGCTGTTAAGAAACTCAAAATGGTGAATGAAATTGACAAGGAATTTGAAGCAGAAGTGAGCGCTATTGGCCAAACCCATCATAGGAATCTGGTGAAACTTCTGGGATTTTGCAATGAAGGAGAGCACAAGCTACTGGTATATGAATTCATGAGTAAGGGAACTTTGGCAAGCTTTGTTTTCGAAGACCAAAAGCCAAGCTGGCATCAAAGGGTGCAAGTTGCAATAGGAACAGCTAAAGGACTCTTGTACTTGCATGAAGAGTGTAACATTCAAATCATACATTGTGATATCAAACCTCAAAATGTCTTGCTTGATGACTCTTACATAGCTAAAATTTCAGATTTTGGTTTAGCGAAGCTATTGAAGATTGACCAGACTATGACTACAACAGCAATTAGGGGAACTAAAGGGTATGTTGCCGATGAGTGGTTCAAAAACAAGCCAATTACCGTGAAGGTTGATGTTTACAGCTTTGGAGTTTTGTTGTTGGAGCTCATTTGTTGCAGAAAGAACTTTGATATGAACATTGAAGATGAGCATAAGATGATACTGATAGATTGGGCATATGATTGCTTTCACTATAGGAGATTGGACCTGTTAGTGGAAGATGATGATGAAGCACAAATTGACATGAAGAAGGTAGAAGAGTATGTGATGATCGGCATTTGGTGTATTCAAGATGATCCATCAGCAAGACCCACCATGAAGCAAGTTGTACAAATGCTTGAAGGATTCATGGATGTTCCAAATCCTCCTGACCTACCTTCCTTTACAAATCAATGGTAG 2403 0.3978 MALEKPYPIFLSLLLALLLHSVVAQPSKNNIISLGTSLTAVENGSFWPSPSGDFAFGFRKIEKEDGFLLAIWFNKIPDKTIVWSAVLETTGDALVAPNGSKVELKSDGLFQLVDPEGDQIWIASPSRNGTDHAAMLDTGNFVLVGHESQNLWQSFDHPSDTILPGQVLHSPAQLVSRYSQNNFSRGKFLLRLQDDGNLVLWTTHYPMTLANIPYWDSHVFGDGFSLVFNQTGSIFVQSSNKSMVASISSNAPSTQDFYQRAIIDYDGVFKRYTYPKGHSSSAWSVSHNIPEDICNKIVEYTGSGACGFNSYCIFDDGMKSCRCPDGYSFVDPNDVKKGCKQNFVPQSCDETSSEAHHFNFSEMQYTHFPSSYYDYFYQVSEDWCKQVCLDDCHCAVAVFRAGECWKENLPLKNGLIDTPFGGKAFFKIRKVDSSALDPENVHVKNHISKLIVIGSTFLGSSVFLNLLLLVARSKLVVYWSGHNNQEDPKTSPSRPRMNLRSFTYDELVEGTNGFTEELGRGAFSTVYKGVLPDIPGNLVAVKKLKMVNEIDKEFEAEVSAIGQTHHRNLVKLLGFCNEGEHKLLVYEFMSKGTLASFVFEDQKPSWHQRVQVAIGTAKGLLYLHEECNIQIIHCDIKPQNVLLDDSYIAKISDFGLAKLLKIDQTMTTTAIRGTKGYVADEWFKNKPITVKVDVYSFGVLLLELICCRKNFDMNIEDEHKMILIDWAYDCFHYRRLDLLVEDDDEAQIDMKKVEEYVMIGIWCIQDDPSARPTMKQVVQMLEGFMDVPNPPDLPSFTNQW 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00654 800 SMART serkin_6 512 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00654 800 Pfam D-mannose binding lectin 80 168 IPR001480 -
Accr1g00654 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Accr1g00654 800 FunFam S-receptor-like serine/threonine-protein kinase 482 588 - -
Accr1g00654 800 SMART blect_4 29 158 IPR001480 -
Accr1g00654 800 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 38 793 - -
Accr1g00654 800 Pfam Protein kinase domain 516 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00654 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 26 156 - -
Accr1g00654 800 Gene3D - 158 285 IPR036426 -
Accr1g00654 800 Gene3D - 27 157 IPR036426 -
Accr1g00654 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 589 789 - -
Accr1g00654 800 ProSitePatterns Protein kinases ATP-binding region signature. 518 543 IPR017441 GO:0005524
Accr1g00654 800 ProSiteProfiles Bulb-type lectin domain profile. 32 156 IPR001480 -
Accr1g00654 800 Gene3D Transferase(Phosphotransferase) domain 1 589 792 - -
Accr1g00654 800 ProSiteProfiles Protein kinase domain profile. 512 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00654 800 PIRSF SRK 2 800 IPR024171 GO:0004674
Accr1g00654 800 SUPERFAMILY Protein kinase-like (PK-like) 491 782 IPR011009 -
Accr1g00654 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 201 IPR036426 -
Accr1g00654 800 Gene3D Phosphorylase Kinase; domain 1 477 588 - -
Accr1g00654 800 CDD STKc_IRAK 518 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00654 Accr-Chr1 12511775 12514177 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00654 483 783 Receptor kinase-like Gene Family AT1G60800 41.100 1.17e-68 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr1g00654 Pkinase 8.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00654 - - aip:107638596 932.939