Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00648 ATGTCTCATATAACTGTGGAAAGGAACAGGAGAAGACAGATGAACGAGCATCTCAAAGTTTTAAGGTCTTTGACCCCTTGCTTCTATATCAAAAGGGGAGACCAAGCATCAATCATAGGGGGAGTAATAGAGTTCATAAAGGAGCTACACCAAGTAGTGGAAGTTCTGGAATCAAAGAAAAGAAGAAGAAAGAGTTTGAGCCATAGTCCAAGAACACCACTACCGCCGCCACCAGCACCGGCAACCACCATGAAGGAGGAGGAATCAGTTGGAGCATCAGCAAGCTGTAATTCTTCAGTTGCAGATGTGCAAGTGAAGATCTCAGGCTCAAACGTGATTCTTAGAGTGATTTCCCACAAAATAGTAGGTCAAGTTTCAAAGATAATTAGTGTTCTTGAAAGGCTTTCTTTTGAAGTTCTTCATCTCAATATCAGTAGCATGGAGGACACAGTCCTCTACCAATTTGTTGTCAAGATAGGGTTGGAGTGCCAGTTAAGCCTGGAGGAACTAGCAGTGGGAGTACAGCAAACTTTCTGTGATCAGAAGATGTTAACTAGCACAGGGTGA 567 0.4303 MSHITVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVVEVLESKKRRRKSLSHSPRTPLPPPPAPATTMKEEESVGASASCNSSVADVQVKISGSNVILRVISHKIVGQVSKIISVLERLSFEVLHLNISSMEDTVLYQFVVKIGLECQLSLEELAVGVQQTFCDQKMLTSTG 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00648 188 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Accr1g00648 188 PANTHER TRANSCRIPTION FACTOR FAMA 1 178 IPR044283 GO:0003700|GO:0010052
Accr1g00648 188 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 72 IPR036638 GO:0046983
Accr1g00648 188 SMART finulus 4 55 IPR011598 GO:0046983
Accr1g00648 188 Gene3D - 1 67 IPR036638 GO:0046983
Accr1g00648 188 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Accr1g00648 188 FunFam Transcription factor MUTE 1 67 - -
Accr1g00648 188 MobiDBLite consensus disorder prediction 60 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00648 Accr-Chr1 12420321 12421666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00648 1 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 64.356 1.94e-82 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr1g00648 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00648 - - pcin:129292243 268.47