Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00641 ATGAATATCATCTCGGTACCTGCAGTGTGCAAGGTCCAAGCTTCTTCAGTAGTGAATTTCAAAAAGGGACTAAGTATGGACCCTTTCTTCCACCAACACCACCATAAGGACAAGGTGGTCATCATCTTGGGCGCCACTGGCTCCGGCAAGTCAAAGCTTGCCATTGACCTTGCCACCCACTTTGCTCCGGCCGAAATCATCAACTCCGACAAAATGCAAGTTTATCAAGGCCTCGACATCACCACCAATAAGGTCACAGAAGAGGAGTGTCTAGGTGTTCCTCACCATTTGCTTGGCATAGCAGATCCCAACCTCGACTTCACGGCTGCCGACTTCATCCGCCACGCCTCCTCCGCCGTTGATTCCATCATCGACAGACATTGCCTTCCCATTATAGCCGGCGGCTCCAATTCCTACATCGAAGCCTTAGTGCCTGACTTTGAAACCGGCAGGCCGGTCGACTTTTGCTTCCTCTGGGTCGACGTCTCGCTCCCGGTTCTCCACTCCTTCTTGACGGACCGGGTGGACAGGATGGTAGAAGCGGGTCTAATCGAGGAGGTTAGGCAAATGTTTGATTCTCGCGCTGATTACACAAAAGGGATCAGAAAAGCAATCGGAGTTCCAGAGTTGGACCAGTTTCTGGAGGCTGAGTTGTCATCGACGGCCGACGAGAGGACGAAGAAGAAACTTCTAGAAGCAGCCATTGCCAGGATGAAGATAAACAACTGCCGGCTTGCGAGCCGACAGCTGCAGAAGATTCACCGGCTTCACGGCCTATGGAAGCGGAATATGCATCGGCTGGACGCGACGGAGGCACTCATTATGAGGAATAATGGTGAAGAATCTAAGGAGGTGTGGGAGAATCAAGTGGTGAACAAGAGCCGAAGGATCGTTCACAAGTTCTTGTACGAGGAAAGCCATGTTGTTCCGGCCGCCATGTCTTCCAAAACTGTTTTGTATATGCCGCCACCGCGGCGGCCTCCGCTGTCTCGGTTGGTGGCGACGGTTACTGCAACTCATTAG 1023 0.523 MNIISVPAVCKVQASSVVNFKKGLSMDPFFHQHHHKDKVVIILGATGSGKSKLAIDLATHFAPAEIINSDKMQVYQGLDITTNKVTEEECLGVPHHLLGIADPNLDFTAADFIRHASSAVDSIIDRHCLPIIAGGSNSYIEALVPDFETGRPVDFCFLWVDVSLPVLHSFLTDRVDRMVEAGLIEEVRQMFDSRADYTKGIRKAIGVPELDQFLEAELSSTADERTKKKLLEAAIARMKINNCRLASRQLQKIHRLHGLWKRNMHRLDATEALIMRNNGEESKEVWENQVVNKSRRIVHKFLYEESHVVPAAMSSKTVLYMPPPRRPPLSRLVATVTATH 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00641 340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 194 IPR027417 -
Accr1g00641 340 Pfam IPP transferase 73 147 - -
Accr1g00641 340 Pfam IPP transferase 152 251 - -
Accr1g00641 340 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 36 302 IPR039657 -
Accr1g00641 340 FunFam Adenylate isopentenyltransferase 5, chloroplastic 164 264 - -
Accr1g00641 340 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 164 264 - -
Accr1g00641 340 Gene3D - 36 302 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00641 Accr-Chr1 12244193 12245215 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00641 154 318 C2H2 Transcription Factor Family AT2G27760 33.158 1.31e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00641 K10760 - qsa:O6P43_003439 391.734