Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00639 ATGGCACTCCTGCAAAATTCACAAGTTGTGTTTCCTAGATGGTTCGCCATTTCAAAACCATCAATCTCCAAGACTCTGTTTCTAAAACTCCCACTGTATCCTATGTTTAGTTCACTATCAATGTCGATTCCTGCCTCATCCCCAAGTCTTCGCTGTGGCCCCATTTCAGTTTTTTGCTGCAGCTGCAGCTTCAGCTCCAATTCTTCGGCGGAATTCAGTATTCCTCATCCTGCTAAAATCTTCATTAAAGGGCTTCCTCTGTCAACTTCGGAAGGACGTTTGGTTAAGGCATTTTCAGAGTTTGGTGAAGTCAGTCAAGTCAAGCTGTTCATGGATGGAGAATCTGGGCAGTTCCTAGGCGTTGCGTACATTTGGTTTGCCAAGGAAGAGTCTGCACATTTGGCTGTGGAAAAGATGAATGGGAAGTTCTTTGATGGCAGGTTTATTTATGTCAGAATTTCAAAGGCCAGATCATCAAACAACCGGAGGAACAAAGCTCCATACAAGTTTTGA 513 0.4366 MALLQNSQVVFPRWFAISKPSISKTLFLKLPLYPMFSSLSMSIPASSPSLRCGPISVFCCSCSFSSNSSAEFSIPHPAKIFIKGLPLSTSEGRLVKAFSEFGEVSQVKLFMDGESGQFLGVAYIWFAKEESAHLAVEKMNGKFFDGRFIYVRISKARSSNNRRNKAPYKF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00639 170 PANTHER RNA-BINDING MOTIF PROTEIN, X-LINKED 2 73 163 - -
Accr1g00639 170 Gene3D - 63 166 IPR012677 -
Accr1g00639 170 SUPERFAMILY RNA-binding domain, RBD 69 164 IPR035979 GO:0003676
Accr1g00639 170 CDD RRM_SF 80 152 - -
Accr1g00639 170 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 78 156 IPR000504 GO:0003723
Accr1g00639 170 SMART rrm1_1 79 152 IPR000504 GO:0003723
Accr1g00639 170 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 80 149 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00639 Accr-Chr1 12217466 12220187 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00639 75 164 Eukaryotic Initiation Factors Gene Family AT2G36660 36.667 1.24e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00639 - - qsa:O6P43_021635 152.91