Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00592 ATGGTTAAGTTTCTGAAGCCTAACAAGGCAGTGATCCTCCTTCAAGGGCGCTATGCCGGTCGCAAGGCCGTGATTTTGCGCACTTTCGATGACGGCACTCGCGATCGCGCATACGGCCATTGCTTGGTCGCCGGAATTAAGAAGTATCCAAGTAAAGTCATCAAGAAGGATTCCGCCAAGAAGACGGCAAAGAAGTCTAGGGTTAAGGCCTTCGTCAAGCTCGTGAACTACCAGCACCTCATGCCTACGCGTTACACCCTTGATGTGGATCTGAAGGATGTCGTGACGATCGATTCTCTTCAATCGAAGGACAAGAAGGTGACTGCCTTGAAGGAGACTAAGAAGAGGTTTGAGGAGAGGTTCAAAACCGGCAAGAACAGATATGATGATTACTCGATCATTTTGATGGTTGGATGA 417 0.4868 MVKFLKPNKAVILLQGRYAGRKAVILRTFDDGTRDRAYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTALKETKKRFEERFKTGKNRYDDYSIILMVG 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00592 138 Gene3D - 1 129 IPR038655 -
Accr1g00592 138 SUPERFAMILY Translation proteins SH3-like domain 2 111 IPR008991 -
Accr1g00592 138 Coils Coil 100 120 - -
Accr1g00592 138 FunFam 60S ribosomal protein L27 1 133 - -
Accr1g00592 138 CDD KOW_RPL27 6 88 IPR041991 -
Accr1g00592 138 PANTHER 60S RIBOSOMAL PROTEIN L27 1 128 IPR001141 GO:0003735|GO:0005840|GO:0006412
Accr1g00592 138 Pfam Ribosomal L27e protein family 52 128 IPR001141 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00592 Accr-Chr1 11402290 11402937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00592 1 128 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 83.594 4.24e-77 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00592 K02901 - csv:101212413 228.794