Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00588 ATGGGTTGTGTCCATTGCAAGTGTTGTCGTCGCTACATTCCGCCGTCGGAGTGCGGTGGTGCTGGCAGCTGCCGCGCACTCGGTCCGCGCCGTCGCCAAAGGAAACACAAATTTACTCAGAGTTCATTGAAGTTTGCTCCTGTTCCTTCCCACAACTACGTTTTAGAATACTCGTTTCTCACTCAGCAAGGTTACTACCCTGATTCACCTGATAAAGAGAACCAAGATACTCTCTGTATTAGGACTAAGGTTCAAGGTAACCCAAACATCCATTTTTTCGGTGTCTATGATGGGCACGGTCAATGTGGTAGCCAGTGCTCGATTTTTGTTAGGGATACATTGATAGAAACATTATCTAATGACCCTGCATTGTTGGAGGACCCTGTTAAAGCTTATACGTCAGCATTCTTGGCAACGAATTACCAATTACACAACAGTGAGATTGATGATTCTATGAGTGGCACCACTGCAATTACGGTGCTTGTCGTCGGAGACACACTTTATGTTGCTAATGTTGGTGATTCCAGAGCGGTGCTGGCAGTGAAGGATGGGAATTACGTCGTTGCTGAGAACTTATCTTCTGATCAGACACCATTTCGGAGGGATGAATATGAGAGAGTGAAGCTTTGTGGTGCAAGGGTGTTAAGTGTTGATCAGGTGGAAGGGCTTAAGGATCCGGATGTTCAAACATGGGGTGATGAAGAGAGTCAGGGAAGCGATCCTCCAAGGTTGTGGGTCCCAAATGGGATGTATCCTGGAACTGCATTTACAAGGAGTTTAGGGGATAGTTTGGCAGAGACTATTGGTGTCATTGCTACTCCAGAAGTTTCAGTGGTTCAGCTTACATCTAATCATCTTTTCTTTATTGTGGCAAGTGATGGCATATTTGAGTTCCTATCAAGCCAAACTGTTGTAAACATGGCAGCAAGCTATACAGATCCTGGTGAAGCATGTGCTGCCATTGCTGGAGAAGCATATAGACTATGGTTGGAACATGAAAACCGAACAGATGATATAACAATTATCATTGTTCGGATCAAAGGCGTATCTAATGCAGGTACATCTGGAGTTGGACTAGATAGTATTAATATTAGTATGGCAACACGGTCGAGGAGAGGAATTTCTGAAATATCTGCTACCACTTCATCAGATGTTTATTGTTCTGCAATGAGTGAGCCCTCTGATCAGCAGTCCTGTCCAAACACAGTTTCAGTGAGAAGCCCGTCTATAATTGTCCCATCTCCTTCACGTCAAAGTCCGGTTGAATAG 1269 0.446 MGCVHCKCCRRYIPPSECGGAGSCRALGPRRRQRKHKFTQSSLKFAPVPSHNYVLEYSFLTQQGYYPDSPDKENQDTLCIRTKVQGNPNIHFFGVYDGHGQCGSQCSIFVRDTLIETLSNDPALLEDPVKAYTSAFLATNYQLHNSEIDDSMSGTTAITVLVVGDTLYVANVGDSRAVLAVKDGNYVVAENLSSDQTPFRRDEYERVKLCGARVLSVDQVEGLKDPDVQTWGDEESQGSDPPRLWVPNGMYPGTAFTRSLGDSLAETIGVIATPEVSVVQLTSNHLFFIVASDGIFEFLSSQTVVNMAASYTDPGEACAAIAGEAYRLWLEHENRTDDITIIIVRIKGVSNAGTSGVGLDSINISMATRSRRGISEISATTSSDVYCSAMSEPSDQQSCPNTVSVRSPSIIVPSPSRQSPVE 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00588 422 ProSitePatterns PPM-type phosphatase domain signature. 92 100 IPR000222 GO:0043169
Accr1g00588 422 SMART PP2C_4 48 344 IPR001932 -
Accr1g00588 422 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 51 348 - -
Accr1g00588 422 SUPERFAMILY PP2C-like 48 348 IPR036457 -
Accr1g00588 422 ProSiteProfiles PPM-type phosphatase domain profile. 56 346 IPR001932 -
Accr1g00588 422 Gene3D - 44 348 IPR036457 -
Accr1g00588 422 MobiDBLite consensus disorder prediction 390 422 - -
Accr1g00588 422 CDD PP2Cc 72 346 IPR001932 -
Accr1g00588 422 Pfam Protein phosphatase 2C 76 325 IPR001932 -
Accr1g00588 422 PANTHER PROTEIN PHOSPHATASE 62 345 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00588 Accr-Chr1 11312516 11314960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00588 1 351 PP2C-type Phosphatase Gene Family AT3G06270 66.944 7.61e-177 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00588 - - aprc:113872580 625.165