Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00570 ATGGACTGCAATAGACAAGAGGCCTTAAGGGCCAAGAATGTTGCAGAAAAAAAGATGGAGAACAAAGATTTCACTGGGGCCCGTAAAACTGCTCTTAAGGCTCAGCAACTATTTCCTGATCTGGAGAATATAGCTCAGATGCTTATTGTTTGTGATGTTCATTGCTCTGCAGAGAAGAAATTTTGCAATGAAAAAGACTGGTATGGAATTCTTCAAGTAGAGCAGACAGCTAATGATGCAACAATAAGGAAGCAATACAGGAAGTTTGCTCTCCTACTTCATCCTGATAAGAACAAGTTTGCTGGTGCTGAAGCTGCATTTAAGCTGATAGGGGAAGCTCAGGCAGTGCTTTTGGATAGACAGAAACGTGCTGCACATGATAGAAGCAGAAATTCATATTATCCATCACGAAATATTTATGTGAATGTTGATATTGGGGTGCAAAACCATACCGGGACCAATTTCACAAACTTGAATCCTCAGCAGCATCAATCTGGTCAGTCAGCATCTCAGCAGGGATCTAATGATGGTTCCTCTACATTTTGGACTGTTTGCCCATTTTGTTCTATCAGATTTCAATATTATTTAGAAGTTCTAAATAGATCTCTGCGCTGTCAAAGTTGCAACAGGCCCTTTGTTGCATATGACATGAGTGCACAAGGTACAGTTCCACCAGCCTATTCAAATCCGCAACCTTTTGTGCAGCCAAAAGGTGGTCCGAATCATCAATCATTTAAGGTGGAGGTGGGCGTTGGATCTCAAGGTAAGTCACGTAGTAGAAATGTCAACACACAGCCTTTTGATAAGAAAGTCCGTACTTCCCATATCTCTCGAAAGCTTAATGGAAAACGGCAGAGGGAGAAAGTAGTGGAAATTAGTGAAAGCTCTGACTCCATACGCAGCTCTGATTCTGAAAGTGATATGGCTTCTGATGATATCATTTCTGATGAGGATGTTGTTACTGGTGAAAGAAAAGGTGCCACTTTTAGAGAAGAGAATGCACGTAGATCTGCACGGAAAAAACAGCAGGTTTCCTACAAGGAAAATGCGAGTGATGATGACAGTGATGACATAAACATTTCAAAGAGGGAGAACGGTTTGACTGATGATCTAGAACATCATGAGAAAGAGCTAAAGCAGAAGCATGGTCTTTATCCTGAAGAAACATTACTGAATAGAAAGGGGGAAACTAAGGAGGTGTTGGGAAAAACAGTAGAAGGTTCAAAGACAACTGCTGAAGTTAGTGAGCATTTTAAACCTGATTCAGCCTGCAATGTAACAGAGCAGCCTAATATTATAGTCTGTCCTGATGCAGAGTTTAATGACTTTGATAAGGACAAGAAGAAAGATTGTTTTGCAGCTGGGCAAGTTTGGGCTGTTTATGATACACATGATGGCATGCCTAGATTCTATGCTGTAATTAAAAAAGTTTTCTCCTCTAGGTTCAAGCTGCGGATAACATGGTTTGAACCAGAACCGAGTGATGAGGATGAAATTAATTGGGTAAACAAGCAATTGCCAGTTGCTTGTGGAATGTATGGGCTTAGACACTCTGAAACCACAGAAGATCTTCCCATGTTTTCTCACCGAGTTCTGTGCGAAAAAATTGGAAGTAACACTTTTAAAGTATATCCTAGAAAGGGAGAAACCTGGGCTCTCTATAAAAATTGGGATATCAAATGGTACATGGATGTGGAATCTCATCAGAAGTATGAAATCGAGTTCGCCGAAATCTTGACTGATTATGTTGAAGGTGAGGGTGTATTTATTGCATACCTGGCTAAATTGAAAGGCTTTGTGAGTCTCTTCGCTAGAGTTAAGAAGGAAGGCGCCTACCCAATTAAAATTTCATATGCAGAGTTATTCAGATTTTCTCACAGGGTTCCATCTTTTAAAATGACTGGTCAGGAAAGAGTTGGTGTTCCTGTAGGGTCTTGGGAACTTGATCCTGCGGCTTTGCCTTCAAGTATCGAAGAGGTTGCTGTTCCAAATGATTTGGAGGTGAAGGTTGGTCATTCCCCATCCGATGGTGTGAGTAGAAGATCTTCAGATAGATTGAAGCCCATGATGGCACCTGATGGAGATTTACATGCTTTCCAGGCTAATTCTGAAACAAGCAATTTCGCAAAGAACAATGGTTCAGTTAAGTCTGTTGAAGATTGTAGGGCTCCTTTGCCTACGACCCAAGGTCCTATGGAAGTTCCAGATCCTCAATTCTACAATTTTGATGATGGGAAGTCCCCAGAGAAGTTTCAGGCTGGTCAGATTTGGGCATTTTATAGTGATGAAGATGGCCTGCCTAGATACTATGGTGAGATTATGGAAATCAGAAGGAGCCCAGGTCTTGAATTGCATGTTATGTGGCTTGCTTCCTGCTGGCTACCAGATAACACCATTAGATGGGAAGACAACGACATGCTTATCTCTTGTGGCAGGTTTAAAAGTAAAATTGGGAATTCAAATGTTTATACTGACACCCTCTCCCTTTCACATCAGGTAAGTGTTAATTTTGACGTAGGGAGCAATGAATATTCCATCTTTCCAAGGAAAGGTGAGGTTTGGGCATTATATAGGAAATGGTCACCTAAAATCAAAGGCTCCGATCTGGTAAACTGGGAGTATGATGTAGTGGAAATTCTTGAAGAAAATGCCGCATGGTTTGAAGTTTTATTCATGGAGATAGTTGGTGGATATAATTCAGTTTTCAAGCCGAAAACATGTGATGGATCACCCTTCACCATGAGAGTACCCCAGGCACAGTTGCTGAGGTTCTCCCACCAAATCCCAGAATTCAAACTAACAGAGAAGCATGGCGATCTGAAAGGCTTCTGGGAGCTTGATCCAGGAGCTGTACCCGTCCACTTTTGGACTTCCCAGTAG 2880 0.4156 MDCNRQEALRAKNVAEKKMENKDFTGARKTALKAQQLFPDLENIAQMLIVCDVHCSAEKKFCNEKDWYGILQVEQTANDATIRKQYRKFALLLHPDKNKFAGAEAAFKLIGEAQAVLLDRQKRAAHDRSRNSYYPSRNIYVNVDIGVQNHTGTNFTNLNPQQHQSGQSASQQGSNDGSSTFWTVCPFCSIRFQYYLEVLNRSLRCQSCNRPFVAYDMSAQGTVPPAYSNPQPFVQPKGGPNHQSFKVEVGVGSQGKSRSRNVNTQPFDKKVRTSHISRKLNGKRQREKVVEISESSDSIRSSDSESDMASDDIISDEDVVTGERKGATFREENARRSARKKQQVSYKENASDDDSDDINISKRENGLTDDLEHHEKELKQKHGLYPEETLLNRKGETKEVLGKTVEGSKTTAEVSEHFKPDSACNVTEQPNIIVCPDAEFNDFDKDKKKDCFAAGQVWAVYDTHDGMPRFYAVIKKVFSSRFKLRITWFEPEPSDEDEINWVNKQLPVACGMYGLRHSETTEDLPMFSHRVLCEKIGSNTFKVYPRKGETWALYKNWDIKWYMDVESHQKYEIEFAEILTDYVEGEGVFIAYLAKLKGFVSLFARVKKEGAYPIKISYAELFRFSHRVPSFKMTGQERVGVPVGSWELDPAALPSSIEEVAVPNDLEVKVGHSPSDGVSRRSSDRLKPMMAPDGDLHAFQANSETSNFAKNNGSVKSVEDCRAPLPTTQGPMEVPDPQFYNFDDGKSPEKFQAGQIWAFYSDEDGLPRYYGEIMEIRRSPGLELHVMWLASCWLPDNTIRWEDNDMLISCGRFKSKIGNSNVYTDTLSLSHQVSVNFDVGSNEYSIFPRKGEVWALYRKWSPKIKGSDLVNWEYDVVEILEENAAWFEVLFMEIVGGYNSVFKPKTCDGSPFTMRVPQAQLLRFSHQIPEFKLTEKHGDLKGFWELDPGAVPVHFWTSQ 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00570 959 MobiDBLite consensus disorder prediction 283 307 - -
Accr1g00570 959 Pfam DnaJ domain 66 127 IPR001623 -
Accr1g00570 959 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 716 - -
Accr1g00570 959 Gene3D DnaJ domain 62 185 IPR036869 -
Accr1g00570 959 MobiDBLite consensus disorder prediction 317 371 - -
Accr1g00570 959 Pfam Domain of unknown function (DUF3444) 731 936 IPR024593 -
Accr1g00570 959 Pfam Domain of unknown function (DUF3444) 431 637 IPR024593 -
Accr1g00570 959 PRINTS DnaJ domain signature 102 122 IPR001623 -
Accr1g00570 959 PRINTS DnaJ domain signature 68 86 IPR001623 -
Accr1g00570 959 PRINTS DnaJ domain signature 86 101 IPR001623 -
Accr1g00570 959 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Accr1g00570 959 MobiDBLite consensus disorder prediction 226 371 - -
Accr1g00570 959 SUPERFAMILY Chaperone J-domain 61 134 IPR036869 -
Accr1g00570 959 MobiDBLite consensus disorder prediction 247 270 - -
Accr1g00570 959 SMART dnaj_3 65 122 IPR001623 -
Accr1g00570 959 MobiDBLite consensus disorder prediction 152 174 - -
Accr1g00570 959 CDD DnaJ 66 119 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00570 Accr-Chr1 10834240 10837119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00570 4 239 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.400 1.55e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00570 - - gmx:100779228 1026.16