LGRPv2

Gene search

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr1g00562	390	CDD	F-box_AtTLP-like	38	82	-	-
	Accr1g00562	390	Pfam	F-box domain	38	84	IPR001810	GO:0005515
	Accr1g00562	390	SUPERFAMILY	F-box domain	30	81	IPR036047	GO:0005515
	Accr1g00562	390	SUPERFAMILY	Tubby C-terminal domain-like	87	390	IPR025659	-
	Accr1g00562	390	Gene3D	-	31	83	-	-
	Accr1g00562	390	ProSitePatterns	Tub family signature 1.	320	333	IPR018066	-
	Accr1g00562	390	PANTHER	TUBBY-RELATED	25	388	-	-
	Accr1g00562	390	Pfam	Tub family	99	385	IPR000007	-
	Accr1g00562	390	Gene3D	Tubby Protein; Chain A	95	390	IPR025659	-
	Accr1g00562	390	ProSitePatterns	Tub family signature 2.	375	390	IPR018066	-
	Accr1g00562	390	FunFam	Tubby-like F-box protein	95	390	-	-
	Accr1g00562	390	PRINTS	Tubby superfamily signature	218	245	IPR000007	-
	Accr1g00562	390	PRINTS	Tubby superfamily signature	302	319	IPR000007	-
	Accr1g00562	390	PRINTS	Tubby superfamily signature	169	193	IPR000007	-
	Accr1g00562	390	PRINTS	Tubby superfamily signature	153	169	IPR000007	-
	Accr1g00562	390	PRINTS	Tubby superfamily signature	368	390	IPR000007	-
	Accr1g00562	390	PRINTS	Tubby superfamily signature	347	366	IPR000007	-
	Accr1g00562	390	PRINTS	Tubby superfamily signature	320	336	IPR000007	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr1g00562	Accr-Chr1	10706381	10708931	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr1g00562	12	390	TUB Transcription Factor Family	AT2G47900	74.346	0.0	570

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	TUB	Accr1g00562		Tub	4.4e-112	CL0395

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr1g00562	K19600		-	cave:132168101	664.84