Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00552 ATGGGTGGGTGTTTTCCTTGCTTTAGATCATCAAACGAGGACAAAGGGTTGAAGGAAGTAGCAGTCAACAAGGATTCCTTTAAAGAAGGTTCAACTGTTGCTAAGTCTAACCACAAGAATAGGGTTAGCTCAGATAAATCAAAATCGAAAAGTGGCTCTGATCCTAAGAAGGAACCACCCGTTCCTAAGGAACCAACAGCCCATATTGCTGCACAAACATTCACATTCCGGGAGCTTGCAGCTGCAACAAAGAATTTTAAGCCAGAATGCTTATTAGGTGAAGGAGGATTTGGACGTGTCTACAAAGGTTGTCTTGAGAGCACGGGACAAGTAGTTGCTGTAAAACAGCTTGATCGCAATGGCCTTCAAGGAAATCGAGAATTCTTGGTGGAAGTTCTCATGCTTAGCCTCTTGCACCATCCCAACCTTGTCAACTTAATTGGTTATTGTGCTGATGGTGATCAAAGGCTTCTTGTTTATGAATTTATGCCATTGGGCTCCTTGGAGGATCATTTACATGATCTTCCTCCTGACAAGGAGCCTCTAGACTGGAACACAAGAATGAAAATTGCTGCTGGTGCTGCTAAGGGATTGGAATATTTGCATGACAAAGCAAATCCCCCTGTTATTTACAGAGACTTAAAGTCATCCAACATCCTCCTTGATGAGGGTTACCATCCCAAGCTATCAGATTTTGGGCTTGCAAAGCTTGGTCCTGTTGGTGATAAGACTCATGTATCTACCCGAGTAATGGGAACATATGGCTACTGTGCTCCAGAGTATGCCATGACCGGCCAACTCACTCTAAAGTCTGATGTATATAGCTTTGGAGTTGTCTTTCTTGAACTTATCACCGGGCGCAAAGCTATTGACAATACTCGTGCACCCGGAGAGCATAATCTTGTTGCCTGGGCACGACCTCTTTTTAAAGACCGTAGGAAGTTTCCAAAAATGGCTGATCCGCTACTTCAAGGGCGTTACCCAATGCGAGGACTCTACCAAGCACTTGCAGTTGCAGCGATGTGTTTGCAGGAACAAGCTGCTACAAGGCCCCTTATTGGGGATGTTGTGACTGCTCTCACATACCTGGCCTCACAGAAATACGACCCAAATGCATCCAATCAGAATAGTAGGGTTGGAACCCCAAGGAGCAAGGATGACCGACGGAGCATGGCAGATGGCGTTATGGATAGCCCTGATCAGGGGCAGGGTGACGGCTCCCCTTCCACTCATAAGAACTCGCTGGATGTCCAGAGGAGAGATAGTAGGGATCCAAGTGTCGGGAAAGATTTAGGCAGGAGTGAAACTGGATCAGCAAGAAGATGGGGATTCGATGATGGAGAAAGGCTGGACTCTCAGAGAGACAGCCCTGTAAATACTGGGAGGACGAGGGAAACTGCGAGGAACCGTGACCTGGACAGAGAACGTGCGGTTGCAGAAGCAAAAGTATGGGGTGAGAATTGGAGAGAAAAAAAGAGGGCTAATGCAGTGGGTAGCTTTGATGCTACAAATGACTGA 1518 0.4657 MGGCFPCFRSSNEDKGLKEVAVNKDSFKEGSTVAKSNHKNRVSSDKSKSKSGSDPKKEPPVPKEPTAHIAAQTFTFRELAAATKNFKPECLLGEGGFGRVYKGCLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQKYDPNASNQNSRVGTPRSKDDRRSMADGVMDSPDQGQGDGSPSTHKNSLDVQRRDSRDPSVGKDLGRSETGSARRWGFDDGERLDSQRDSPVNTGRTRETARNRDLDRERAVAEAKVWGENWREKKRANAVGSFDATND 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00552 505 MobiDBLite consensus disorder prediction 27 66 - -
Accr1g00552 505 Gene3D Phosphorylase Kinase; domain 1 70 162 - -
Accr1g00552 505 FunFam Serine/threonine-protein kinase PBS1 61 162 - -
Accr1g00552 505 Pfam Protein kinase domain 91 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00552 505 Gene3D Transferase(Phosphotransferase) domain 1 163 386 - -
Accr1g00552 505 MobiDBLite consensus disorder prediction 369 475 - -
Accr1g00552 505 SMART serkin_6 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00552 505 SUPERFAMILY Protein kinase-like (PK-like) 62 360 IPR011009 -
Accr1g00552 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Accr1g00552 505 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00552 505 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
Accr1g00552 505 PANTHER OS07G0668900 PROTEIN 4 374 - -
Accr1g00552 505 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Accr1g00552 505 CDD STKc_IRAK 92 361 - -
Accr1g00552 505 MobiDBLite consensus disorder prediction 27 63 - -
Accr1g00552 505 MobiDBLite consensus disorder prediction 414 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00552 Accr-Chr1 10502900 10508139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00552 4 395 Glycoside Hydrolase AT3G07070 62.341 1.27e-172 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Accr1g00552 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00552 - - gmx:100814575 856.284