Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00547 ATGTTCTTCGTGAAGGGTTTTACATCAGTTCGGTCACTCTATAATCTTTTTCAACATGTTTCATCGTCAACCTTCGCTCCCATGTACAGCACTGCCGCATCTTCTACACCCACTTCAGAGAAAATGTCTTTCACCGTGAATTACCTCACTAGCAAATTTGGATTTTCCCGAGGAACCGCATCGACGATTTCCCAGCGCGTTTCTCTCAAGTCATCGGAAAAACCAGACTTCGTTCTCACCCTTTTCAGAAGCTGTGGTTTTACGAACTCGCAGATTGGCAATGTCATCAAGAAAGCACCGAGATTGCTTCTGTGTGATGCTGGGAAGAGTATTTGGCCTAAGCTTGATTTCTTACTATCCAAAGGTGCGTCTAGCTCTCAACTTGTCGACATTGTGACCAGATGCCCTCGTTTCTTATTCAGAAGCTTAGAAAATCATTTAATACCTAGTTATAATTTTGTTAAAGACTTTGTTGGATCTGATCAAAGGACTATCACCTCAATCACGCGTAGTCATAGAATAATTTGTTGTGATTTCCTAGAAACTAACATCAAACTCTTGCTTGACATTGGAGTGCCCAAATCTGGCATTGCTGCTTTGCTTCATTCCTGGCCTAGCTTGTTTACTATGAATTTAGATAAATTTAGAGTGGCAGTTGAGGGATTAAAGGATAGAGGTTTTGACCCTTCAACATCTAAATTCATTCCTGCATTGTATGCCACAAATAAGTTAAGCAAATCGGTTTGGAATAGTAAGGTTGAATTCTTTAAGAAGTGGGGCTGGTCTGAGGAGGATATTGATAAAGCATTTGTACTGCATCCTTATTGTATGCTAAAATCTTTATCTAAGATTAAGGCAGTGATGGAGTTTTTTGTGAATGACATGGGTTGGGAATCCATTTTACTTGCGAGTAATCCCATATTTTTTTCAATGAGTTTGGAGAGAAGACTCATTCCAAGGGCTTATGTCTTGCAATATATTCATTCAAGAGGTTTAATTAAGAATGCCTGTATCATTTACCCTTATTATATTACCGAAAAGATATTCCTTGAGAAATATGTCATTCGTTTTGAGGATGAAGCTCCTGGATTATTGAAGTTGTATCAAGAGACAATGAATCGTTCAAGAAAAACTTGA 1137 0.3852 MFFVKGFTSVRSLYNLFQHVSSSTFAPMYSTAASSTPTSEKMSFTVNYLTSKFGFSRGTASTISQRVSLKSSEKPDFVLTLFRSCGFTNSQIGNVIKKAPRLLLCDAGKSIWPKLDFLLSKGASSSQLVDIVTRCPRFLFRSLENHLIPSYNFVKDFVGSDQRTITSITRSHRIICCDFLETNIKLLLDIGVPKSGIAALLHSWPSLFTMNLDKFRVAVEGLKDRGFDPSTSKFIPALYATNKLSKSVWNSKVEFFKKWGWSEEDIDKAFVLHPYCMLKSLSKIKAVMEFFVNDMGWESILLASNPIFFSMSLERRLIPRAYVLQYIHSRGLIKNACIIYPYYITEKIFLEKYVIRFEDEAPGLLKLYQETMNRSRKT 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00547 378 SMART mt_12 165 193 IPR003690 GO:0003690|GO:0006355
Accr1g00547 378 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Accr1g00547 378 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Accr1g00547 378 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Accr1g00547 378 SMART mt_12 198 228 IPR003690 GO:0003690|GO:0006355
Accr1g00547 378 SMART mt_12 93 124 IPR003690 GO:0003690|GO:0006355
Accr1g00547 378 FunFam Mitochondrial transcription termination factor-like 143 361 - -
Accr1g00547 378 Pfam mTERF 181 337 IPR003690 GO:0003690|GO:0006355
Accr1g00547 378 Pfam mTERF 79 228 IPR003690 GO:0003690|GO:0006355
Accr1g00547 378 PANTHER CGI-12 PROTEIN-RELATED 42 356 IPR003690 GO:0003690|GO:0006355
Accr1g00547 378 Gene3D Transcription termination factor 3, mitochondrial 160 360 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00547 Accr-Chr1 10395535 10396671 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr1g00547 mTERF 4.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00547 K15031 - qsa:O6P43_021713 300.827