Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00514 ATGCCGGACATGGATGGTTTTAAGCTTCTCGAGCATGTTGGACTCGAGATGGATCTTCCTGTGATCATGATGTCTGTGGATGGAGAGACTGGGAGGGTGATGAAGGGTGTTCAGCATGGAGCATGTGATTACCTCCTCAAGCCTATAAGGATGAAAGAGCTGCGAAATATATGGCAACATGTGATCAGGAAAAGGATGCGCGAGGCAAGAGAATTTGGGAGCCTTAAGGGTTTTGAGGGCTTTCAGTTAATGAGAAATGGAGAAGATCAGTATGATGAAGGGAACTTGTTTGCTATAGAAGATATGACCTCAACAAAGAAAAGGAAAAACCCAGATAGCAAACGTGATAACAAGGAATTTGGAGACCAATCTTCTACAAAGAAATCCAGAGTAGTTTGGTCAGTGGATCTTCACCAGAACTTTGTCAAGGCTGTGAATGAGCTTGGATTTGATAAAGTTGGTCCCAAGAAAATACTTGATTTGATGAATGTTCCATGGTTGACTCGAGATAATGTTGCGAGCCACTTACAGAAATACCGGCTCTATTTGAGCAGGTTGCAGAAGGCTGGAGATCAAGATTCTTCCTCAAGTGGGATTCAACAATCTGATTTAGTTTCAGAAGATCCTGCAGCAAGTTTCTCTTTTCAGAACCCAATAAACAGGCAACAACAAAATGATGTTTCAATTGACAGCCATAAATATTCATCAGATGGAACGTTACAACTTCAGAATGTGGATGCTGAAATTAGTCATGAAGGTAATAATCTCAAGGCGATCATCTCAGAGGCTACAATAGATAAAAGAACAGAGTTGCCTGCTAGCATTCAAGATACAAAAACAAGAGAGAGTGCGCAGAAGATCAATGATCAGTCTTTTGCAACTCCAGATTCGGAAGCAAGCCATGCAGCAGTATTCAAGTGCACCAACCCTTGGAGGGATTTCCCAGAAATGCAACTCAAAAAACACCAGCCATATCTTTCAATGAAGGATCGCTTCAGCCACTTGCCATTACCTGGTACGGAGCATCTCATCCAGGTTGGTGATCAATCACAAGCAGATGCTTCAATTCGATCCGACCCATCAGTTATGGAGAGAGAAACTGCTTCCTGCATTGAAACCAAGCCTTTGTATGCTGCTGATCACACCAGCGATTATGCCAGTTCTGTTACTTCCATAGGAAGTGCTGGAGGTTTTTCCATGCAGTCCTATGCTGCTGATTACACCAGCGATTATGCGAGTTCTGTTACTTCCATAGGAAGTGCTAGAGGTTTTTCCATGCAGTCCAAGAGCTTTATGGGGAACGATGAATCTTTAGAACCGGTTTCTACTTCAAATTTCGGCAGGAAAACAGAGGGACTTAATCTTAACTCTGTTTCTGACCTGGAATCTCACCAACGAGACCTACTTTTAGGAGGTGAGTTCCCTTCTTCTGCTGCACCTTTGGAGGAGGACTTGAAATCCTTTTGGCTACAAGGTGAACGCTGTATGAACTCTGGACTGCAGAATATTGAGATGCCAGAGTATTATTATGATCCAGGACTTGCTGGGGAAGTTCCAATTCATTTGTTCGATACGGCTGAAAATTCAGCAGTAGATCAAGGCCTTTTCATAGCTTATGATCTTTGA 1626 0.428 MPDMDGFKLLEHVGLEMDLPVIMMSVDGETGRVMKGVQHGACDYLLKPIRMKELRNIWQHVIRKRMREAREFGSLKGFEGFQLMRNGEDQYDEGNLFAIEDMTSTKKRKNPDSKRDNKEFGDQSSTKKSRVVWSVDLHQNFVKAVNELGFDKVGPKKILDLMNVPWLTRDNVASHLQKYRLYLSRLQKAGDQDSSSSGIQQSDLVSEDPAASFSFQNPINRQQQNDVSIDSHKYSSDGTLQLQNVDAEISHEGNNLKAIISEATIDKRTELPASIQDTKTRESAQKINDQSFATPDSEASHAAVFKCTNPWRDFPEMQLKKHQPYLSMKDRFSHLPLPGTEHLIQVGDQSQADASIRSDPSVMERETASCIETKPLYAADHTSDYASSVTSIGSAGGFSMQSYAADYTSDYASSVTSIGSARGFSMQSKSFMGNDESLEPVSTSNFGRKTEGLNLNSVSDLESHQRDLLLGGEFPSSAAPLEEDLKSFWLQGERCMNSGLQNIEMPEYYYDPGLAGEVPIHLFDTAENSAVDQGLFIAYDL 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00514 541 Gene3D - 1 109 - -
Accr1g00514 541 Pfam Response regulator receiver domain 1 57 IPR001789 GO:0000160
Accr1g00514 541 CDD REC_typeB_ARR-like 1 62 - -
Accr1g00514 541 NCBIfam myb-like DNA-binding domain, SHAQKYF class 128 181 IPR006447 GO:0003677
Accr1g00514 541 SUPERFAMILY Homeodomain-like 126 185 IPR009057 -
Accr1g00514 541 MobiDBLite consensus disorder prediction 103 123 - -
Accr1g00514 541 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 243 IPR045279 GO:0009736
Accr1g00514 541 FunFam Two-component response regulator 124 187 - -
Accr1g00514 541 Gene3D - 124 187 - -
Accr1g00514 541 ProSiteProfiles Response regulatory domain profile. 1 62 IPR001789 GO:0000160
Accr1g00514 541 SUPERFAMILY CheY-like 1 69 IPR011006 -
Accr1g00514 541 Pfam Myb-like DNA-binding domain 130 180 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00514 Accr-Chr1 9674457 9676966 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00514 21 538 Response Regulator Gene Family AT1G67710 37.153 4.55e-65 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Accr1g00514 Response_reg 2.6e-08 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00514 K14491 - gmx:100797421 572.778