Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00513 ATGAATAAGAATGCGTTTTCTTCTCGACGCGGTGCTTTTCCGGCTGGTCTCCGAGTTCTCGTCGTCGATGATGATTTGACATGGCTCAGGATTCTTGAGATGATGCTGAAGAAGTGCTCTTACGAAGTAACCACATGCTGTCTAGCAAGAGAGGCTCTAAACTTGCTTCGTGAAAGGAAAGATGGATATGACATTGTGATCAGCGATGTGAATATGCCGGACATGGATGGTTTTAAGCTTCTCGAGCATGTTGGACTCGAGATGGATCTTCCTGTGATCATGATGTCTGTGGATGGAGAGACTGGGAGGGTGATGAAGGGTGTTCAGCATGGAGCATGTGATTACCTCCTCAAGCCTATAAGGATGAAAGAGCTGCGAAATATATGGCAACATGTGATCAGGAAAAGGATGCGCGAGGCAAGAGAATTTGGGAGCCTTAAGGGTTTTGAGGGCTTTCAGTTAATGAGAAATGGAGAAGATCAGTATGATGAAGGGAACTTGTTTGCTATAGAAGATATGACCTCAACAAAGAAAAGGAAAAACCCAGATAGCAAACGTGATAACAAGGAATTTGGAGACCAATCTTCTACAAAGAAATCCAGAGTAGTTTGGTCAGTGGATCTTCACCAGAACTTTGTCAAGGCTGTGAATGAGCTTGGATTTGATAAAGTTGGTCCCAAGAAAATACTTGATTTGATGAATGTTCCATGGTTGACTCGAGATAATGTTGCGAGCCACTTACAGAAATACCGGCTCTATTTGAGCAGGTTGCAGAAGGCTGGAGATCAAGATTCTTCCTCAAGTGGGATTCAACAATCTGATTTAGTTTCAGAAGATCCTGCAGCAAGTTTCTCTTTTCAGAACCCAATAAACAGGCAACAACAAAATGATGTTTCAATTGACAGCCATAAATATTCATCAGATGGAACGTTACAACTTCAGAATGTGGATGCTGAAATTAGTCATGAAGGTAATAATCTCAAGGCGATCATCTCAGAGGCTACAATAGATAAAAGAACAGAGTTGCCTGCTAGCATTCAAGATACAAAAACAAGAGAGAGTGCGCAGAAGATCAATGATCAGTCTTTTGCAACTCCAGATTCGGAAGCAAGCCATGCAGCAGTATTCAAGTGCACCAACCCTTGGAGGGATTTCCCAGAAATGCAACTCAAAAAACACCAGCCATATCTTTCAATGAAGGATCGCTTCAGCCACTTGCCATTACCTGGTACGGAGCATCTCATCCAGGTTGGTGATCAATCACAAGCAGATGCTTCAATTCGATCCGACCCATCAGTTATGGAGAGAGAAACTGCTTCCTGCATTGAAACCAAGCCTTTGTATGCTGCTGATCACACCAGCGATTATGCCAGTTCTGTTACTTCCATAGGAAGTGCTGGAGGTTTTTCCATGCAGTCCTATGCTGCTGATTACACCAGCGATTATGCGAGTTCTGTTACTTCCATAGGAAGTGCTAGAGGTTTTTCCATGCAGTCCAAGAGCTTTATGGGGAACGATGAATCTTTAGAACCGGTTTCTACTTCAAATTTCGGCAGGAAAACAGAGGGACTTAATCTTAACTCTGTTTCTGACCTGGAATCTCACCAACGAGACCTACTTTTAGGAGGTGAGTTCCCTTCTTCTGCTGCACCTTTGGAGGAGGACTTGAAATCCTTTTGGCTACAAGGTGAACGCTGTATGAACTCTGGACTGCAGAATATTGAGATGCCAGAGTATTATTATGATCCAGGACTTGCTGGGGAAGTTCCAATTCATTTGTTCGATACGGCTGAAAATTCAGCAGTAGATCAAGGCCTTTTCATAGCTTATGATCTTTGA 1839 0.4307 MNKNAFSSRRGAFPAGLRVLVVDDDLTWLRILEMMLKKCSYEVTTCCLAREALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETGRVMKGVQHGACDYLLKPIRMKELRNIWQHVIRKRMREAREFGSLKGFEGFQLMRNGEDQYDEGNLFAIEDMTSTKKRKNPDSKRDNKEFGDQSSTKKSRVVWSVDLHQNFVKAVNELGFDKVGPKKILDLMNVPWLTRDNVASHLQKYRLYLSRLQKAGDQDSSSSGIQQSDLVSEDPAASFSFQNPINRQQQNDVSIDSHKYSSDGTLQLQNVDAEISHEGNNLKAIISEATIDKRTELPASIQDTKTRESAQKINDQSFATPDSEASHAAVFKCTNPWRDFPEMQLKKHQPYLSMKDRFSHLPLPGTEHLIQVGDQSQADASIRSDPSVMERETASCIETKPLYAADHTSDYASSVTSIGSAGGFSMQSYAADYTSDYASSVTSIGSARGFSMQSKSFMGNDESLEPVSTSNFGRKTEGLNLNSVSDLESHQRDLLLGGEFPSSAAPLEEDLKSFWLQGERCMNSGLQNIEMPEYYYDPGLAGEVPIHLFDTAENSAVDQGLFIAYDL 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00513 612 PIRSF RR_ARR_type-B 1 608 IPR017053 GO:0003677|GO:0003700|GO:0009736
Accr1g00513 612 SMART REC_2 17 129 IPR001789 GO:0000160
Accr1g00513 612 ProSiteProfiles Response regulatory domain profile. 18 133 IPR001789 GO:0000160
Accr1g00513 612 Pfam Response regulator receiver domain 19 128 IPR001789 GO:0000160
Accr1g00513 612 CDD REC_typeB_ARR-like 19 133 - -
Accr1g00513 612 FunFam Two-component response regulator 195 258 - -
Accr1g00513 612 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 312 IPR045279 GO:0009736
Accr1g00513 612 MobiDBLite consensus disorder prediction 174 194 - -
Accr1g00513 612 Gene3D - 17 179 - -
Accr1g00513 612 NCBIfam myb-like DNA-binding domain, SHAQKYF class 199 252 IPR006447 GO:0003677
Accr1g00513 612 SUPERFAMILY Homeodomain-like 197 256 IPR009057 -
Accr1g00513 612 SUPERFAMILY CheY-like 16 140 IPR011006 -
Accr1g00513 612 Pfam Myb-like DNA-binding domain 201 251 IPR001005 -
Accr1g00513 612 Gene3D - 195 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00513 Accr-Chr1 9674457 9678376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00513 13 265 Response Regulator Gene Family AT2G25180 54.054 4.31e-82 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Accr1g00513 Response_reg 1.2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00513 K14491 - gmx:100797421 674.855