Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00468 ATGGCTTCTGCTTGTGCTTCCTCCGCCGTCGCCTCCGCCGCCATCTCCACCCCAAGTTCCCAGAAGAATGGAATCATCTTGGGATCAAGGACTTCATTTCTGAGCGGCCGGAAGTTGAAGGTGAACAAGTTCACCGTCGGAGGCCGATCTGTGAGTAGCAAAGTGTGTGCGGTGGCAGCTGATCCCGACAGACCTCTCTGGTTCCCCGGAAGTACTCCTCCTCCGTGGCTCGACGGCAGCCTCCCCGGAGACTTCGGCTTTGATCCTCTCGGTCTCGGATCTGATCCAGAGAGCTTGAGATGGAATGTTCAAGCAGAGCTGGTTCATTGCAGATGGGCAATGTTAGGAGCTGCTGGTATTTTCATCCCAGAGTTCTTAACAAAGATTGGAATTCTCAACACTCCTTCATGGTACACTGCTGGAGAGCTGGAATACTTCACAGACACCACCACACTCTTCATCATCGAGCTCATCTTCATCGGATGGGCCGAGGGAAGGAGATGGGCTGACATCCTCAAGCCTGGCAGCGTCAACACCGACCCCATCTTCCCCAACAACAAGCTCACCGGCACTGATGTTGGGTACCCAGGCGGGCTCTGGTTCGACCCACTTGGCTGGGGCTCTGGCTCGCCGGAGAAGGTCAAAGAGCTTAGAACAAAAGAGATTAAGAACGGAAGATTGGCCATGTTGGCTGTTATGGGTGCTTGGTTCCAGCACATCTACACTGGCACTGGTCCTATTGACAACCTCTTTGCCCACTTAGCAGACCCTGGCCATGCCACCATCTTTGCTGCTTTTTCACCAAAGTGA 810 0.5395 MASACASSAVASAAISTPSSQKNGIILGSRTSFLSGRKLKVNKFTVGGRSVSSKVCAVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIIELIFIGWAEGRRWADILKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00468 269 Gene3D Chlorophyll a/b binding protein domain 74 259 - -
Accr1g00468 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 22 265 IPR001344 GO:0009765|GO:0016020
Accr1g00468 269 SUPERFAMILY Chlorophyll a-b binding protein 57 266 - -
Accr1g00468 269 FunFam Chlorophyll a-b binding protein, chloroplastic 74 259 - -
Accr1g00468 269 Pfam Chlorophyll A-B binding protein 73 239 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00468 Accr-Chr1 9015666 9017365 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00468 52 269 Chloroplast and Mitochondria Gene Families AT3G61470 90.826 3.92e-150 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00468 K08908 - gmx:100784089 491.115