Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00462 ATGGAGAAGAAGACGTCAGAAAACGAAGTTGTTCTGCAAATCCAGGAAAAGGAAGAAGCTTCTTCGTACACGACGAAGAAAGAATCCCAGATGGATTCTTCACCAGAGATAAGAAATGTTAGCCCTAGTTCTGGCAAGCCCCCAAAAATTCCGACAGAGACATTAATCAAACGAAGGTCACTGTCAAGGTCGGAGTTCTCGAAGCCAAAATCCAGATTATTGGAACCACCATATCAGGCTGACCCCAAATTTCTCGAAGCAAAATCTCAAAAGGAAAGTTATGATTCTTCATCTAATAGAAATTCTCCGAATGTGACTTCACCCATGAACAAAAATACAAAAACTCCTCCAAGGAGTAATCCCAGTACAGCTCCAGAAACCCCAGGAACGCCATTGAAGGGGAAAGAAGGAGAAGATGAAGAAGAAGAAGATGATGAAGATGAACAAGTGTACAAAACTGCTGATCTTGAAGTGAGCAAGAGATCAGGTAAGAAAAAGTTGAAACTAATGGCTTTAATTGAAAGAAGTGTTTTTCTTTGCGTTATAGCTGCGTTGATATCGAGCTTGACCATCCATAAACTGCAAAACATGGTGATTTGGAGTCTGAATTTATGGAAATGGTGCGTTTTAGTGTTTGTGATTATCTGTGGTAGAATAATCACAGAGTGGTTCATCAACATCTTGGTTTTCTTGTTTGAGAGGAACCTCGTATTCAAAAGGAAGGTTCTTTATTTTGTTTATGGATTAAAGAAGAGTGTTCAGGCCTTCATTTGGCTAGCTTTGGTTCTTCTAACATGGTTTCTTCTGTTCAATCATGGAGTTAAAAGATCCAGAAGAGCCAGAAAGATTCTGAATTACATAACAGGAGCACTTGCTTCTTGCCTTATAGGAGCAGGTATATGGCTCGTGAAAAATTTATTCACAAAGCTACTAGCTTCTTCTTTCCAATGCTCCAGATTCTTTGACAGGATTCAAGAATCAATTATTCATCAGTACATTGTTCGTATTCTGTCGGGGCCGCCGTTGATGGAGATGGCTGAAATGGTAGGGAAAAGTGGGGGTACTGGTCAGCTCAGTCTTAGGATACTGAACAAAGAGAAGAAAGGAGAGAAAGAAGAGGTCATTGATGTGGACAAGTTGAAGAATATGAAGCAAGACAAGGTTTCTGCTTGGACAATGAAGGGTTTAGTTAATGTGATAAGGAGTTCTGGGTTGTCCACCATACGCAATACACTCGAAAGCTATATCGACGATGATGAGGAAGCAGAGCAGAAAGAGATGGAAATTAACAGCGAGTGGGAAGCAAAAGCAGCAGCTTATAGAATTTTCAAGAATGTAGCCATGCCAGGAAATAAGTACATTGAAGAGGAAGATCTCTTGAGATTCATGAAGAAAGAGGAGGCGGAAAATGTGCTTCCTTTAATTGAAGGAGCTGCAGAAACTGGAAAAATAAAGAGGAAGTCCCTCAAGAATTGGCTGGTGAAAGTTTACTTGGAACGCAAATCACTGGTGCATTCCTTGAATGATACAAAAACTGCTGTTGATGAGCTGAACAATCTAGTCTCGGTGGTTGTGCTCATAATAATCATCATAGTCTGGCTTCTTTTAATGGGATTCCTAACAACTCAGGTGATTCTCTTCATTTCATCTCAGCTTTTACTCTCCGTGTTCATTTTCGGAAACGCAGCCAAGACTTTGTTTGAAGGCATCATATTCGTCTTCGTAATGCACCCTTTCGACGTTGGAGATCGCTGTGTCATTGATGGTGTACAGATGACAGTGGAAGAGATGAATATATTGACGACGGTGTTCTTAAGATATGACAACGAGAAGATATTCTATCCAAATTCAGTTCTAGCCACCAAACCAATCAGCAATTATTACAGAAGCCCAGATATGATTGATTCGGTTGAATTTGCTGTTGATATTGCTACCTCCATGGAGACCATTGGTGCTTTGAAGGCTTCAATAAAAGCATATCTGGAGGGCAAGCCTCAGCATTGGCGTGCAGGGCATAGTGTGGTTGTGAAGAAAATAGAGAATGTGAACAAGATGAATATGGCACTCTATGTGACTCACACCATTAATTTCCAAAACTATGGAGAAAAGAGCAGCAGAAGATCTGAGCTAGTTTTGGAATTGAAGAGAATTTTCCAAAACCTTAATATTACATACCATCTTCTTCCTCAAGATGTTCATCTCAGTTATGTGGGACCAGAAGCACCATGTACTGTTTGGAAATGA 2244 0.4024 MEKKTSENEVVLQIQEKEEASSYTTKKESQMDSSPEIRNVSPSSGKPPKIPTETLIKRRSLSRSEFSKPKSRLLEPPYQADPKFLEAKSQKESYDSSSNRNSPNVTSPMNKNTKTPPRSNPSTAPETPGTPLKGKEGEDEEEEDDEDEQVYKTADLEVSKRSGKKKLKLMALIERSVFLCVIAALISSLTIHKLQNMVIWSLNLWKWCVLVFVIICGRIITEWFINILVFLFERNLVFKRKVLYFVYGLKKSVQAFIWLALVLLTWFLLFNHGVKRSRRARKILNYITGALASCLIGAGIWLVKNLFTKLLASSFQCSRFFDRIQESIIHQYIVRILSGPPLMEMAEMVGKSGGTGQLSLRILNKEKKGEKEEVIDVDKLKNMKQDKVSAWTMKGLVNVIRSSGLSTIRNTLESYIDDDEEAEQKEMEINSEWEAKAAAYRIFKNVAMPGNKYIEEEDLLRFMKKEEAENVLPLIEGAAETGKIKRKSLKNWLVKVYLERKSLVHSLNDTKTAVDELNNLVSVVVLIIIIIVWLLLMGFLTTQVILFISSQLLLSVFIFGNAAKTLFEGIIFVFVMHPFDVGDRCVIDGVQMTVEEMNILTTVFLRYDNEKIFYPNSVLATKPISNYYRSPDMIDSVEFAVDIATSMETIGALKASIKAYLEGKPQHWRAGHSVVVKKIENVNKMNMALYVTHTINFQNYGEKSSRRSELVLELKRIFQNLNITYHLLPQDVHLSYVGPEAPCTVWK 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00462 747 MobiDBLite consensus disorder prediction 52 70 - -
Accr1g00462 747 MobiDBLite consensus disorder prediction 26 48 - -
Accr1g00462 747 Gene3D - 578 627 IPR023408 -
Accr1g00462 747 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 15 736 IPR016688 -
Accr1g00462 747 MobiDBLite consensus disorder prediction 137 151 - -
Accr1g00462 747 MobiDBLite consensus disorder prediction 91 120 - -
Accr1g00462 747 Pfam Mechanosensitive ion channel 518 723 IPR006685 GO:0016020|GO:0055085
Accr1g00462 747 FunFam Predicted mechanosensitive ion channel 578 627 - -
Accr1g00462 747 MobiDBLite consensus disorder prediction 1 153 - -
Accr1g00462 747 MobiDBLite consensus disorder prediction 1 25 - -
Accr1g00462 747 PIRSF Memb_At2g17000 2 745 IPR016688 -
Accr1g00462 747 SUPERFAMILY Sm-like ribonucleoproteins 568 627 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00462 Accr-Chr1 8959290 8962533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00462 34 735 Mechanosensitive Ion Channel Family AT5G12080 51.558 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00462 K22048 - qsu:112023488 958.362