Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00461 ATGTCTCTCTTGTACTATGGCCTTGCAGTTGTAGGAACAGCAGCCATAATATTAGCCGTATACAACCTTATCATCTTCAAACGTTGTGGCGGCCGCCGCTCACAATCGTCACCTTCATCGTCTTCATCCTCATCATCACAATTTTCAAATCGTGCAACTGAAACGGCTATGGCAGCCACTAGAAGTTGTGATATAAGGTTGAACAGAAACTCGACACTGTCAAGCTACAAGTACAAGAAAGAATCAGAACAAGACTGTGATTGTGACAGTGTATGCCCAGTTTGTCTTTCTGGGTTTGAAGAAGGAGAAGAGGTAACGAAGTTGCCGAGGTGTAAGCATAGATTTCATGCCCTGTGCATAGACATGTGGCTTTACTCTCACTTCGATTGCCCAATTTGTAGAACACCTGTGCTGCAATTTTGCCAGCTTTTTCCGCCACCGGCCAGTTCTGGTGAAGAAGGGTTGCTCCGATCAGCCATTAATGGTGCCGTCGCGGCTTGA 501 0.4611 MSLLYYGLAVVGTAAIILAVYNLIIFKRCGGRRSQSSPSSSSSSSSQFSNRATETAMAATRSCDIRLNRNSTLSSYKYKKESEQDCDCDSVCPVCLSGFEEGEEVTKLPRCKHRFHALCIDMWLYSHFDCPICRTPVLQFCQLFPPPASSGEEGLLRSAINGAVAA 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00461 166 Pfam Ring finger domain 92 134 IPR001841 -
Accr1g00461 166 SUPERFAMILY RING/U-box 74 146 - -
Accr1g00461 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 140 IPR013083 -
Accr1g00461 166 ProSiteProfiles Zinc finger RING-type profile. 92 134 IPR001841 -
Accr1g00461 166 SMART ring_2 92 133 IPR001841 -
Accr1g00461 166 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 8 137 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00461 Accr-Chr1 8929440 8929940 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00461 8 152 C3H Transcription Factor Family AT5G17600 36.486 5.26e-18 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00461 - - adu:107479105 157.532