Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00460 ATGAGTCATATCTTCAAAAAACAGGCCTCATCTTCCTCCAAATTCAGAGCACTCAGAAATCAAAACATGTCTCTCTTGTACTATGGCCTTGCAGTTGTAGGAACAGCAGCCATAATATTAGCCGTATACAACCTTATCATCTTCAAACGTTGTGGCGGCCGCCGCTCACAATCGTCACCTTCATCGTCTTCATCCTCATCATCACAATTTTCAAATCGTGCAACTGAAACGGCTATGGCAGCCACTAGAAGTTGTGATATAAGGTTGAACAGAAACTCGACACTGTCAAGCTACAAGTACAAGAAAGAATCAGAACAAGACTGTGATTGTGACAGTGTATGCCCAGTTTGTCTTTCTGGGTTTGAAGAAGGAGAAGAGGTAACGAAGTTGCCGAGGTGTAAGCATAGATTTCATGCCCTGTGCATAGACATGTGGCTTTACTCTCACTTCGATTGCCCAATTTGTAGAACACCTGTGCTGCAATTTTGCCAGCTTTTTCCGCCACCGGCCAGTTCTGGTGAAGAAGGGTTGCTCCGATCAGCCATTAATGGTGCCGTCGCGGCTTGA 567 0.4515 MSHIFKKQASSSSKFRALRNQNMSLLYYGLAVVGTAAIILAVYNLIIFKRCGGRRSQSSPSSSSSSSSQFSNRATETAMAATRSCDIRLNRNSTLSSYKYKKESEQDCDCDSVCPVCLSGFEEGEEVTKLPRCKHRFHALCIDMWLYSHFDCPICRTPVLQFCQLFPPPASSGEEGLLRSAINGAVAA 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00460 188 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 24 159 IPR044675 -
Accr1g00460 188 ProSiteProfiles Zinc finger RING-type profile. 114 156 IPR001841 -
Accr1g00460 188 SUPERFAMILY RING/U-box 97 168 - -
Accr1g00460 188 SMART ring_2 114 155 IPR001841 -
Accr1g00460 188 Pfam Ring finger domain 114 156 IPR001841 -
Accr1g00460 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 162 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00460 Accr-Chr1 8929440 8930006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00460 30 174 C3H Transcription Factor Family AT5G17600 36.486 1.01e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00460 - - adu:107479105 157.918