Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00456 ATGCTCACGTGCATAGCTCGTCCGAAGAAACTTGGACATGTGTCAGTGAATCAGCCCGATGAATCCGATTCTAGCAACTCAAGCGCCGCCAAGAGTCAAGCTACCAAATCCCTCACTTCTCAGCTCAAGGATATGGCGTTGAAGGCATCCGGAGCTTACAAGAATTGCGCCCCCTGCACCGGACCACAGACACAGAATCGACTCAGGGCCAGTACTGAGTCAGAGGCGGAATCGGATCGGTTCCGATGGTCCTACCGGCGAACGGCGAGCTTAAACTCGACATCGACGAGGACATGGGGGAAGGAGATGGAAGCGAGGCTGAAGGGGATTTCGAGTGGGGAGGGGACGCCGAACTCTGCCAGCGGACGGCGGGTTGAGCCGGTGGTTCTGTTTGTCGAAGAGAACGAACCTAAGGAGTGGGTGGCGCAGGTGGAAACCGGCGTATTAATCACCTTTGTATCACTTCCGAGCGGAGGGAATGATTTGAAGCGAATCCGGTTCAGCCGAGAAATGTATAACAAATGGCAAGCGCAAAAATGGTGGGCAGACAACTATGAAAGGGTCATGGAACTTTACAACGTTCAGAAGCTTAATCGCCAAGCCTTCCCTCTTCCAACACCACCAAGATCTGAAGATGAGCTCTCAAAGCTTGAATCAGTGGAAGATTTCCCTGCGACGCCTCCTCTAACCAAAGAACGATTACCTCGTAATATACATCGCCCAACGGGGATGGGAACGGGATACTCATCATCGGATTCTTTTGATCACCGTTCAATGCAATCCCGGCATCATCATGACTCGGCTGGCCTCAACTCAACCCCTAAAGTCTCCACCATAAGCACGGCCAAGACAGAAGCTTCATCCATGGACGCCTCTATCAGAAGCAGCTCATCCAGGGAGGCTGATCCTTCAATCAGCAATGTCAGTGATCAAGACACTGAATGGGTCGAACAGGATGAACCTGGGGTTTATCTTACTATCAGAGCATTGCCAGGTGGCAAAAGAGAGCTCAGACGAGTCAGATTCAGCCGAGAAAAATTTGGGGAGGTGCATGCTAGATTATGGTGGGAAGAGAATCGAGGCAGGGTACATGAACAATACTTGTGA 1107 0.514 MLTCIARPKKLGHVSVNQPDESDSSNSSAAKSQATKSLTSQLKDMALKASGAYKNCAPCTGPQTQNRLRASTESEAESDRFRWSYRRTASLNSTSTRTWGKEMEARLKGISSGEGTPNSASGRRVEPVVLFVEENEPKEWVAQVETGVLITFVSLPSGGNDLKRIRFSREMYNKWQAQKWWADNYERVMELYNVQKLNRQAFPLPTPPRSEDELSKLESVEDFPATPPLTKERLPRNIHRPTGMGTGYSSSDSFDHRSMQSRHHHDSAGLNSTPKVSTISTAKTEASSMDASIRSSSSREADPSISNVSDQDTEWVEQDEPGVYLTIRALPGGKRELRRVRFSREKFGEVHARLWWEENRGRVHEQYL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00456 368 MobiDBLite consensus disorder prediction 1 42 - -
Accr1g00456 368 MobiDBLite consensus disorder prediction 17 42 - -
Accr1g00456 368 ProSiteProfiles BRX domain profile. 138 193 IPR013591 -
Accr1g00456 368 MobiDBLite consensus disorder prediction 57 71 - -
Accr1g00456 368 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 368 IPR044532 -
Accr1g00456 368 Pfam Transcription factor BRX N-terminal domain 23 59 IPR027988 -
Accr1g00456 368 ProSiteProfiles BRX domain profile. 313 368 IPR013591 -
Accr1g00456 368 MobiDBLite consensus disorder prediction 265 312 - -
Accr1g00456 368 Pfam Transcription factor regulating root and shoot growth via Pin3 138 192 IPR013591 -
Accr1g00456 368 Pfam Transcription factor regulating root and shoot growth via Pin3 313 367 IPR013591 -
Accr1g00456 368 MobiDBLite consensus disorder prediction 203 315 - -
Accr1g00456 368 MobiDBLite consensus disorder prediction 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00456 Accr-Chr1 8892342 8898542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00456 1 368 Major Intrinsic Protein MIP AT1G31880 40.674 1.07e-85 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00456 - - gmx:100794109 587.415