Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00453 ATGACAGGCTCATCATCAAGAAATGTTCTAAAGCCGCAGCCAAAAAGAGAAAAGAAGACGAGCTTTGTGATGAGAAAAGTTCGATTGACTTACACAGACCCAGATGCAACAGATTGTTCGAGCGAAGAAGAAGAAGAAGGTGGTGGATCTTTGAAGATCATCAATGGCTGCAAGAGAATTGTGAAGGAGATTCTTGTTCCGACCAAATTGTGCGCATCAGTAGTGGGTACCAGTTTTGTGGCCAGCACCAGCAATAATAAGGGGACGAATCGTCGGAAATCGTCAGGCTTGCCGAGAGGAGTACGACGTCGTAAATGGGGGACCTACGTGGCGGAGATCCGAGACCCGTTTCGCAGGACCCGAATATGGCTTGGAACTTACAACACTGTGGAAGAAGCTGCTTTGGCTTATGAGAAGAAGGAAAAGGAATTTGAAAGCTTGATGATGTCTGCTCCATCTATATCATATGTGCTTGACGTCACCCCAAATAATAATAATAATAATATTATTAATAATAGTCATTCATTGGGTAGTGGGAGTGGCAGTGACGATTCTTCTGTGAAAGCAGAACAGTATGATGAAGAAGAAGAAGTGTACATTCAACAGTTACTAAAGGAGCCATTTGTGCCATCACTGGACGATAATAGAGAAATGGCGTTTTTTGTTGGTGAGGAATTTGCTGATAATAATTTGGTCAATAATAATCGTAATAATAATAATGATGCTAATGGAGGTTTTATCTGTCTTGATGGTGAAAATGAAGGTGGTGAGGGAAGAAGCAGTGTTCCATTAATATCTGTTGAGAGTGATTCAAGTGATGCAGAGTTAGGTTGGATTGATGAAGCTTTCAATGATGGTGAATGGTTAGGAAGTTTTTAA 879 0.4107 MTGSSSRNVLKPQPKREKKTSFVMRKVRLTYTDPDATDCSSEEEEEGGGSLKIINGCKRIVKEILVPTKLCASVVGTSFVASTSNNKGTNRRKSSGLPRGVRRRKWGTYVAEIRDPFRRTRIWLGTYNTVEEAALAYEKKEKEFESLMMSAPSISYVLDVTPNNNNNNIINNSHSLGSGSGSDDSSVKAEQYDEEEEVYIQQLLKEPFVPSLDDNREMAFFVGEEFADNNLVNNNRNNNNDANGGFICLDGENEGGEGRSSVPLISVESDSSDAELGWIDEAFNDGEWLGSF 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00453 292 MobiDBLite consensus disorder prediction 169 186 - -
Accr1g00453 292 SUPERFAMILY DNA-binding domain 98 144 IPR016177 GO:0003677
Accr1g00453 292 Gene3D AP2/ERF domain 99 147 IPR036955 GO:0003700|GO:0006355
Accr1g00453 292 SMART rav1_2 99 165 IPR001471 GO:0003700|GO:0006355
Accr1g00453 292 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 25 144 - -
Accr1g00453 292 ProSiteProfiles AP2/ERF domain profile. 97 157 IPR001471 GO:0003700|GO:0006355
Accr1g00453 292 MobiDBLite consensus disorder prediction 1 23 - -
Accr1g00453 292 CDD AP2 99 137 IPR001471 GO:0003700|GO:0006355
Accr1g00453 292 PRINTS Ethylene responsive element binding protein signature 120 136 IPR001471 GO:0003700|GO:0006355
Accr1g00453 292 PRINTS Ethylene responsive element binding protein signature 98 109 IPR001471 GO:0003700|GO:0006355
Accr1g00453 292 MobiDBLite consensus disorder prediction 169 190 - -
Accr1g00453 292 Pfam AP2 domain 99 143 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00453 Accr-Chr1 8836605 8837483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00453 5 148 AP2-EREBP Transcription Factor Family AT1G68550 41.060 1.02e-24 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr1g00453 AP2 8.5e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00453 - - aprc:113866790 125.176