Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00450 ATGGCCGTCTTCTTCCTTCCTTCTCATACTATATTACTTGCATTCATTTTCTTTTCCCCCTCCCTTATTGCAGCTCAATCGACAACCAACAGTGGAACAAACTTCTCATGCCCTGTTGATTCACCACCTTCTTGTGAAACTTATGTATCATACCATGCACAGTCTCCTAACTATTTGAGTCTGGTGAACATATCTGATGTATTTGGGATCAGTCCTTTATCCATGGCAAGAGCTAGTAACTTATCAGATGAAGATAGTAAGCTGATTCCAGGCCAGCTCTTACTGGTTCCTGTGACTTGTGGCTGCGCCAGAAACCGCTCTTTCGCCAATATAACCTATGAGATCAAGGCAGGTGATACCTTTGACTTAGTTTCAAACGCTGCATTTGAGAATCTCACGAATTGGCATTTAGCAGAAGAGTTTAACCCCAATCAGAATCCATATCTTTTGATGCCAGGCACCAAAGTAGTCTTCCCTTTGTTCTGCAGGTGCCCTTCAAGAAGCCATTTGGCCAAAGGCATAAAATTTTTGATAACGTATGTTTGGCGACCTTGTGACAATGTTTCTGTCATTAGTACCCAGTTTAATGCCTCTGAAATGGACATAATGACAGAAAACAAGTACCAGAACTTCACCTCTACAGCCAACCTTCCAATTTTCATCCCAGTGTCACAGCTTCCAGATGTTTCTCGATTTTATTCATCACCAAAGAGAAAGGGAAACAATCATTGCCTTTTGGTTATCGTAGGTATTATATTGGGATGCACTCTTCTAACTGTTCTTATAACTATGTCGCTGGTGTATGTTTATTGTCTGAGAAAGAAAAAGATTAGCTTGAAAAAAAGTGCTTCATTTTTGGAGACAGCAGATAAGCTACTTTCTGGGGTCTCGGGTTTTGTAAGCAAGCCAACCATGTACGAGTTTAGTGTGATTATGGAAGCTACTATGAATCTTAATCAACAATGCAGGATTGGGGGATCAGTCTATAAGGCCAAAATCGACGGGCAGGTCTTAGCAGTGAAAGAAGTGAAGGAAGACGTCATGGAGGAGCTAAAGATTCTGCAGAAGGTAAATCACGCGAATCTGGTGAAATTAATGGGCTTCTCATCAGACAACAACGGAAATTGCTTCTTGGTTTATGAATATGCTGAAAATGGATCTCTTGATCATTGGCTGTACTCCATGTCTGCTTCAGACGCTTCTTCTGGTTCTGTGTCATTTCTCACATGGAGCCAAAGGATATGCATTGCACTGGACGTGGCCATGGGTTTGCAATACCTGCATGAACTCACTCAACCAAGAATAGTCCACAGGGACATCAGAACCAGTAACATACTTCTCGACTCAAGTTTCAAGGCCAAGATAGCGAACTTCCCGATGGCAAGACCTTCTACAAACCCAATGATGTTAAAATCAGATGTTTTTGCTTTTGGCGTTGTTCTGCTGGATTTGCTCACAGGCAAGAAAAGCATGGCGACAGATGAAAAAGGGGAGGTGGTGATGGTGTGGAAGGATATTAGAGGAATCCTTGATGGAGAAGATGAGAAGAAGAAAAAGGAGAGACTAAGAAAATGGATAGATCCTAGGCTGGGAAACTTTTACGCCATTGATGATGCTCTAAGCTTGGCCTTCTTGGCAGTCACTTGCACTGCAGATAAGCCTTTGTCCAGACCAACTATGGCACAAGTTGTTCTTAGCCTGTCGCTTCTGAGTAAATCATGTCCTGGTGTGAAGGTAGAACGATGGACTTGTCCAGGTGGGTTAGATGCTGAAGTTCCTCAAATGATGAGTCCTATCACAGCTCGTTGA 1809 0.4256 MAVFFLPSHTILLAFIFFSPSLIAAQSTTNSGTNFSCPVDSPPSCETYVSYHAQSPNYLSLVNISDVFGISPLSMARASNLSDEDSKLIPGQLLLVPVTCGCARNRSFANITYEIKAGDTFDLVSNAAFENLTNWHLAEEFNPNQNPYLLMPGTKVVFPLFCRCPSRSHLAKGIKFLITYVWRPCDNVSVISTQFNASEMDIMTENKYQNFTSTANLPIFIPVSQLPDVSRFYSSPKRKGNNHCLLVIVGIILGCTLLTVLITMSLVYVYCLRKKKISLKKSASFLETADKLLSGVSGFVSKPTMYEFSVIMEATMNLNQQCRIGGSVYKAKIDGQVLAVKEVKEDVMEELKILQKVNHANLVKLMGFSSDNNGNCFLVYEYAENGSLDHWLYSMSASDASSGSVSFLTWSQRICIALDVAMGLQYLHELTQPRIVHRDIRTSNILLDSSFKAKIANFPMARPSTNPMMLKSDVFAFGVVLLDLLTGKKSMATDEKGEVVMVWKDIRGILDGEDEKKKKERLRKWIDPRLGNFYAIDDALSLAFLAVTCTADKPLSRPTMAQVVLSLSLLSKSCPGVKVERWTCPGGLDAEVPQMMSPITAR 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00450 602 Gene3D Transferase(Phosphotransferase) domain 1 383 466 - -
Accr1g00450 602 Gene3D Transferase(Phosphotransferase) domain 1 467 578 - -
Accr1g00450 602 Gene3D Phosphorylase Kinase; domain 1 295 382 - -
Accr1g00450 602 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 14 574 - -
Accr1g00450 602 ProSiteProfiles Protein kinase domain profile. 286 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00450 602 SUPERFAMILY Protein kinase-like (PK-like) 323 567 IPR011009 -
Accr1g00450 602 Pfam Protein tyrosine and serine/threonine kinase 341 464 IPR001245 GO:0004672|GO:0006468
Accr1g00450 602 ProSitePatterns Tyrosine protein kinases specific active-site signature. 435 447 IPR008266 GO:0004672|GO:0006468
Accr1g00450 602 SMART tyrkin_6 318 567 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00450 Accr-Chr1 8761779 8763587 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00450 11 573 Receptor kinase-like Gene Family AT3G21630 30.372 1.97e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Accr1g00450 PK_Tyr_Ser-Thr 6e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00450 - - gmx:100301877 712.22