Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00427 ATGATGGCAAATAACTTAACGGGGCAGCTTTTGGGCTCAGAGATACATGGATTCCATACGATGCAGGAGTTGGATGTTGGAATTATTATGGAGGAAGCAAGACGTAGATGGCTTCGTCCCAATGAGATTCATGCCATACTCTGCAATTACAAACATTTTACCATCAATGTCAAGCCAGTGACTCTGCCGAAAAGTGGTACTATTGTATTATTTGATAGGAAGAAGCTAAGGAACTTTCGTAAAGATGGACACAATTGGAAAAAGAAAAAGGATGGGAAAACTGTTAAAGAAGCTCATGAGCACTTAAAAGTTGGTAATGAAGAAAGGATCCATGTATACTACGCTCATGGTGAAGAAAACTCAAACTTAGTTCGCAGATGCTATTGGTTGCTTGATAAGAATCTGGAGCATATTGTCCTTGTTCATTACCGTGAAACACAGGAGCCACAAGGTTCTCCAGTCACACCTGTATATTCAAATGCTAGTTCTCCCTCTGATCCAACAACACAATGGGTATTATCAGAAGAATTAGATTCTGGGATCAACAAGGCATGCGGTGGTGAGATGAATGACAATTTAACAGTCAAAAGTCATGAAATGAGGCTTCATGAGATCAATACACTTGAATGGGATGACCTAGTGGCTACAAATGATCTTACCACCGCTACTACCTCCACTCCTGCTGGAGGAAAGGTTCCTTGCTTTCATCAAGAAAAACAAATTTTACTGAATGGAAATTCGAGCAGGGTAGTCAACAATCAGTCTGCAGAAATTCATTGTTTTGATATTCTGAACAATTCAATTGATGGGAACAATAGTGCTCGATACAGTTTTCCTGAAAGTTCAAATCTTCAGACTGCCAACTGTCAAGTAAATTCAAATGAACAGAGTGAACATTCTATCACCATGGGTGGTGGTGATTTTGTAAACAGTATCTTCAATGACACTCTGCAAAGTCAGGACAGCTTTGGAAATTGGATAAACCATATGATGCCTGATTCATCATGTTCTATTGATGACTCAGGTCTTGAATCCCCAGTTTCATCTGTTCATGATTCATACTCTTCAGGATTGGATAATCATCAATCTTCTCTGCCAGAGCAATTATTTAATATCACTGATGTGTCTCCTGTCTGGGCATGCTCCACTGAGAAAACAAAGGTCCTAATAACTGGATTTTTTCGTGATGACTATATGCACCTTGGGAAGTCCAATCTGTTTTGTATCTGTGGGGATGTATATGTTCCTGCAGAAATTGTTCAAGTTGGTGTCTACCGATGCTGGGTACCACCACATTCCCCTAGTTTTGTGAATCTCTATATGAGTTTTGATGGCCATAAGCCCATAAGTCAAGTTTTCAATTTTGAGTATCGTGCTACTGTTTTGCAAGACCCTGCAGCTTCCGTTGAAGAGAGGTACAACTGGGACGAGTTCCGACTTCAAATGAGGCTTGCATATTTGATCTTTTCTACACAAAAGAGTCTTGACATTACCTCTAGCAAAGTATCGCCTGATGCACTGAAGGAGGCTAAAAAATTTGTCTTCAACACATCATATCTTTCTAAAAGTTGGCATAACTTGATTAAGTCTACTGAAGGCCACAAAACTCCATTTCCACAAACAAAAGATGCCTTTTTTGAAATTGCATTGAAGACAAAACTAAAGGAATGGCTGTTGGAGAGAATTCTTTTAGGCTGTCAAACTACTGAATTTGATGCCCAAGGTCAAGGTGTAATCCATTTATGCTCGATTTTAGGATATACATGGGCTGTTTCATTATTTTCATGGTCTGGTTTTTCATTGAATTTCCGTGATAAATTTGGATGGACAGCCCTGCACTGGGCAGCTTATTATGGAAGAGAGAAAATGGTTGCTGCTCTATTGTCTGCAGGGGCAAGGCCAAATTTGGTCACGGATCCTACTTCTCAACATCCTGGTGGTTTTACTGCCGCTGATCTGGCTCAGATGAAAGGTTATAATGGCTTAGCAGCTTACCTTTCGGAAAAGTCTCTGGTTGAGCAGTTCAATGACATGAGGATCGCAGGAAATATCAGTGGCTCGCTGGAAACTGTTAGCACAAGTGATCCAGTGAATTCTGAGAAGTTCAATGAGGATCAACTGTATATGAAGGATACATTAGCTGCTTACCGGACCGCTGCTGAGGCTGCAGCACGCATACAGGCTGCATTTAGGGAGCATTCACTAAAATTACGATCTCATGCGGTTGAACTTTTCTGTCCGGAGGCTGAAGCACGCCAAATAGTTGCAGCAATGAAGATCCAGCATGCTTTTAGAAACTTCGAGTCGAGGAAGTCTATGGCAGCTGCTGCTCACATCCAGCATACCTTCCGTACATGGAAGATGCGTAGAGAATTTCTCAATATGCGTCGGCAGGCGATCAAGATTCAGGCTGCTTTCCGGGCCTTTAAGGAGCGGAAGAACTACCGCAAAATCATCTGGTCTGTTGGAGTGGTTGAGAAAGCAATCCTGCGATGGCGTTTAAAGAGAAAGGGCTTCCGTGGCCTACGTGTAAATCCTGTTCAGGAAGTGGTAGGTCAGAAGGAAGATACAGAGTTTGTTACAGAGGAGGACTTCTTCCGGATTGGCAGGAAACAAGTCGAAGAACGTGTTGAGAGAGCTGTAGTACGTGTTCAAGCTATGTTTCGCTCTAAGAAAGCACAAGTTGATTACAGGAGGATGAAACTAGCCCATAATCAAGCAAAGCTGGAACTAGAATATGAAGAACTCCTCAATTCTGAGGTTGATATGGGAGTGAAGGCATAG 2784 0.4181 MMANNLTGQLLGSEIHGFHTMQELDVGIIMEEARRRWLRPNEIHAILCNYKHFTINVKPVTLPKSGTIVLFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEENSNLVRRCYWLLDKNLEHIVLVHYRETQEPQGSPVTPVYSNASSPSDPTTQWVLSEELDSGINKACGGEMNDNLTVKSHEMRLHEINTLEWDDLVATNDLTTATTSTPAGGKVPCFHQEKQILLNGNSSRVVNNQSAEIHCFDILNNSIDGNNSARYSFPESSNLQTANCQVNSNEQSEHSITMGGGDFVNSIFNDTLQSQDSFGNWINHMMPDSSCSIDDSGLESPVSSVHDSYSSGLDNHQSSLPEQLFNITDVSPVWACSTEKTKVLITGFFRDDYMHLGKSNLFCICGDVYVPAEIVQVGVYRCWVPPHSPSFVNLYMSFDGHKPISQVFNFEYRATVLQDPAASVEERYNWDEFRLQMRLAYLIFSTQKSLDITSSKVSPDALKEAKKFVFNTSYLSKSWHNLIKSTEGHKTPFPQTKDAFFEIALKTKLKEWLLERILLGCQTTEFDAQGQGVIHLCSILGYTWAVSLFSWSGFSLNFRDKFGWTALHWAAYYGREKMVAALLSAGARPNLVTDPTSQHPGGFTAADLAQMKGYNGLAAYLSEKSLVEQFNDMRIAGNISGSLETVSTSDPVNSEKFNEDQLYMKDTLAAYRTAAEAAARIQAAFREHSLKLRSHAVELFCPEAEARQIVAAMKIQHAFRNFESRKSMAAAAHIQHTFRTWKMRREFLNMRRQAIKIQAAFRAFKERKNYRKIIWSVGVVEKAILRWRLKRKGFRGLRVNPVQEVVGQKEDTEFVTEEDFFRIGRKQVEERVERAVVRVQAMFRSKKAQVDYRRMKLAHNQAKLELEYEELLNSEVDMGVKA 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00427 927 ProSiteProfiles IQ motif profile. 878 906 IPR000048 GO:0005515
Accr1g00427 927 MobiDBLite consensus disorder prediction 149 168 - -
Accr1g00427 927 Pfam IQ calmodulin-binding motif 797 816 IPR000048 GO:0005515
Accr1g00427 927 ProSiteProfiles IQ motif profile. 795 819 IPR000048 GO:0005515
Accr1g00427 927 FunFam Calmodulin-binding transcription activator 5 366 462 - -
Accr1g00427 927 ProSiteProfiles IQ motif profile. 772 801 IPR000048 GO:0005515
Accr1g00427 927 ProSiteProfiles Ankyrin repeat region circular profile. 607 635 - -
Accr1g00427 927 ProSiteProfiles Ankyrin repeat profile. 607 639 IPR002110 GO:0005515
Accr1g00427 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 720 822 IPR027417 -
Accr1g00427 927 SMART ANK_2a 607 636 IPR002110 GO:0005515
Accr1g00427 927 SUPERFAMILY E set domains 371 458 IPR014756 -
Accr1g00427 927 FunFam calmodulin-binding transcription activator 5 537 677 - -
Accr1g00427 927 Gene3D - 540 676 IPR036770 -
Accr1g00427 927 Gene3D - 771 819 - -
Accr1g00427 927 Pfam CG-1 domain 32 145 IPR005559 GO:0003677
Accr1g00427 927 SMART CG_1_2 29 147 IPR005559 GO:0003677
Accr1g00427 927 SMART iq_5 794 816 IPR000048 GO:0005515
Accr1g00427 927 SMART iq_5 876 898 IPR000048 GO:0005515
Accr1g00427 927 SMART iq_5 775 793 IPR000048 GO:0005515
Accr1g00427 927 SMART iq_5 752 774 IPR000048 GO:0005515
Accr1g00427 927 SUPERFAMILY Ankyrin repeat 554 669 IPR036770 -
Accr1g00427 927 Gene3D Immunoglobulins 366 461 IPR013783 -
Accr1g00427 927 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 25 906 - -
Accr1g00427 927 Pfam Ankyrin repeats (3 copies) 562 636 IPR002110 GO:0005515
Accr1g00427 927 ProSiteProfiles CG-1 DNA-binding domain profile. 26 152 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00427 Accr-Chr1 8263521 8272736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00427 29 910 CAMTA Transcription Factor Family AT3G16940 54.124 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Accr1g00427 Ank_2 1.2e-06 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00427 K21596 - gmx:100793970 1276.92