Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00408 ATGGGTTCACCGAACATTAGGGACGTTTTAACAGCGTTTAGTCCTTCGTTTGACTTGTTCGCTATCAGCGTTGGAGATGGTCGCATAAAGATATGGGATACACTAAATGGTCATATCCAGACGGAGTTTGCAGACATCACATCAAGTGATGCAACAGGTATATATGCAGGATCAATGAAGGGTCATCTTTCAATAGATTATACGTGTATGAAGTGGTTGTCATTAGAAAGAAAGAAAAAAAGGAAACACACGTCCTCATTGTTAGTACTTGGGACAGGTAGTGGTGACTTGTTGGCACTTGATGTGTCTGCCGGTCAATTAAATTGGAGAATTGGTGACTGCCATCCCGGAGGCGTGAAAGCTGTTTCATCTTCTGCAAATGCATCATGTGTCTATACTGCAGGTGCAGATGGAATGGTTTGCAAGATTGATTGTAAGACAGGAAGCATGTTGGAAAAATTCAAAGCTTCTTCAAAGGCAGTATCCTGTATGTCTGTTTCTTCAGATGGGAAGACAATAGCTACTGCAGCAGCACAACTAAAGATTTTTGATTCTTCTGATAACAAAAAGATACAGAAGTTCTTTGGCCATCCTGGATCTATTCGGTGTCTTGTCTTCACTGAGGATGGGAAGTATATTCTATCATCTGCTGTTGGTGAAAGATATGTTGCTGTTTGGAGGATTGATGGGGCCAAAAAGAAGTCAGTTAGTTGTGTTCTTGCTATGGAGCATCCTGCTGTTTTTCTTGATAGCAGCTGCACTCCAAGCAGGGAACTTGACAATGTTGGCGTATGCATTTTGGCTATCTCAGAAGTTGGTGATTGTTATGTTTGGTTTGGAAATGGTATTGAAGAACTACGCAATGTGAAGCCCACTAAAATATCATTATCTTTGGAAGACATTTCTTCGAGAAATTACATGGGTGCATCACCGGCAGTGTATGCTGCAAAGTTAGAAAGCATTAACGATCATACCTCGGGGCAGGTTTTACTTGTTCATGGGTTGCTTGTAAAGCCTTCATTTCAAAAAATTTCAGTGCAATCTGGCTCGGACATAAAATTGAATTTCTCTGATGATGGTATTCTTCTTCGGCTGAACAAGTCCCTCGTGAAGTCTAAGAAGACAAAAGATGTAAAGAAAGTTACTGCTCTAGACCGTGCTAATGCGGAGGATGCTTTGCTCCCAATTCCTAAGCTTTATGATTCTCATGTGCAAGAGAAACAATTTCCAGACTCTTCAGGCATGGAGGTTATGGATGATTCAGTTAGAACTAATGAATCTGTTTCTATGGAGATTGAAGATGAGATGGCCAAGGGCGAGACTGATGTGATCTGTGTGGAGGACCAAATGAGATCTCTTGGGATTCTTGACGATGAAAATGATCTTGAATCGAATATCAAATTTAGCTCTTCATTGTTAAAGGGTGTTGATCTTGAAGCTACTCTTCCAATGAGAAAGATAAGAGCAACTGTCTTGACTATGGAGCCATCTGAAGCATATAAGCTCCTGGAAGTTTTGCTGACTGTTTGGCAATTAAGGTCATCTACTGGCAAGTATGCTCTTCCGTGGATATATAGCATATTAGTGATTCATGGTCACTACTTAATTTCTCGGGAAAATATGACACATATGCTTGATTCCTTGATCAAGATGGCTGGCTCTAGAGGATCTGCAGTTGAGACTTTGTTACAGTTATCAGGCCGCCTGCAATTGGTGACAACACAGATTAACAAAGCTTCTAAAAATACAACTCATTCAGTGAGAGATCCTCAAATAGAAGAAAGCGAAGATGAGGACAAAGAGGATTATTTTGAAGAGGAAGGAGATGATGCATCTGAAATAAGTAGTGATGATGATGACAGCTAG 1866 0.4057 MGSPNIRDVLTAFSPSFDLFAISVGDGRIKIWDTLNGHIQTEFADITSSDATGIYAGSMKGHLSIDYTCMKWLSLERKKKRKHTSSLLVLGTGSGDLLALDVSAGQLNWRIGDCHPGGVKAVSSSANASCVYTAGADGMVCKIDCKTGSMLEKFKASSKAVSCMSVSSDGKTIATAAAQLKIFDSSDNKKIQKFFGHPGSIRCLVFTEDGKYILSSAVGERYVAVWRIDGAKKKSVSCVLAMEHPAVFLDSSCTPSRELDNVGVCILAISEVGDCYVWFGNGIEELRNVKPTKISLSLEDISSRNYMGASPAVYAAKLESINDHTSGQVLLVHGLLVKPSFQKISVQSGSDIKLNFSDDGILLRLNKSLVKSKKTKDVKKVTALDRANAEDALLPIPKLYDSHVQEKQFPDSSGMEVMDDSVRTNESVSMEIEDEMAKGETDVICVEDQMRSLGILDDENDLESNIKFSSSLLKGVDLEATLPMRKIRATVLTMEPSEAYKLLEVLLTVWQLRSSTGKYALPWIYSILVIHGHYLISRENMTHMLDSLIKMAGSRGSAVETLLQLSGRLQLVTTQINKASKNTTHSVRDPQIEESEDEDKEDYFEEEGDDASEISSDDDDS 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00408 621 PANTHER OS03G0300300 PROTEIN 5 620 - -
Accr1g00408 621 MobiDBLite consensus disorder prediction 580 621 - -
Accr1g00408 621 SMART WD40_4 147 184 IPR001680 GO:0005515
Accr1g00408 621 SMART WD40_4 104 144 IPR001680 GO:0005515
Accr1g00408 621 SMART WD40_4 3 33 IPR001680 GO:0005515
Accr1g00408 621 SMART WD40_4 187 227 IPR001680 GO:0005515
Accr1g00408 621 Pfam Dip2/Utp12 Family 483 573 IPR007148 -
Accr1g00408 621 Pfam WD domain, G-beta repeat 190 226 IPR001680 GO:0005515
Accr1g00408 621 MobiDBLite consensus disorder prediction 594 621 - -
Accr1g00408 621 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 12 236 IPR011047 -
Accr1g00408 621 Gene3D - 9 299 IPR015943 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00408 115 252 U-box Gene Family AT2G33340 28.169 2.36e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00408 K14546 - gmx:100784148 769.229