Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00404 ATGGCGACGGAGCAGTTGATGTCTGGTGGTGGTCCCCGCTACGTTCAAATGCAATCGGAGCATTCGACGGCGATTTCTTCTTCTGCATCATTCCGATTTGGCGGTGGCCCTGAGCCTACTCGAATTTTCGATGAGTTGCCAGAAGCCATCATCGTCTCCGTCTCTCGTCCCGATGCCGGCGACATCAGTCCCATGCTTCTTTCTTACACAATTGAGTTTCGTTATAAGCAGTTCAAGTGGCAATTGGCGAAGAAGGCTTCTCACGTATTTTATTTGCATTTTACATTGAAGAAACGTGCCTTTATTGAGGAAATTCATGAGAAGCAAGAGCAGGTTAAAGAATGGCTTAACAATCTAGGAATAGTAGAACACACTGCTGTGGTACAAGATGATGATGAAGCTGAAGATGAAACTGTTCATCTACATCATGATGAAAGTGCTAAGGACAGAGATGTACCATCTAGTGCTGCTCTACCAATTATACGGCCAGCCATAGGTAGGCAGGATATTATGTCAGACAGAGCAAAGACTGCAATGCAAGGATATTTGAATCACTTTTTAGGAAATATCAATATTGTTAACTCTCCAGAGGTTTGCAAGTTTTTGGAGGTGTCAAAGTTATCTTTCACACCTGAATATGGCCCTAGCTTGAAGGAAGATTATGTGATGGTTAAGCATCTGCCAACAGTTCCTAAGGATGATGATTCTAGAAAATGTTGTTCATCTCGGTGTTTTAATTGTTGCAATGACAACTGGCCGAAGGTTTGGGCTGTCCTAAAACCTGGATTCTTAGCATTGCTGGCTGATCCATTTGATAGCCAACCTTTGGACATAATTGTTTTTGATGTTCTCCCTGCCTCAGATGGGAATGGGGATGGTCGTTTATCACTGGCAAAAGAAATAAAAGAACGAAATCCTTTACGTCATTCATTCAAGGTGACTTGCGGAAACCGAAGCATTAGGATAAGAGTAAAAAGTAGTGGTAAAGTCAAAGATTGGGTTGCTGCAATTAATGATGCTGGTCTCAGGCCTCCTGAAGGATGGTGTCATCCTCATCGCCATGGTTCATTTGCTCCTCCAAGAGGCTTGATTGAAGATGGAAGTCAGGCCCAGTGGTTTGTTGATGGCAGGGCAGCATTTGAGGCCATAGCTTCTTCAATTGAGGATGCTAAATCAGAGATATTTATTTGTGGGTGGTGGGTTTGCCCGGAACTGTATTTGCGGCGTCCTTTTCATTCTCATGCTTCATCAAGGCTAGATAATTTGCTGGAAGAAAAGGCTAAGCAAGGGGTTCAGATCTACATTCTTCTATATAAAGAGGTGGCTCTTGCTTTGAAAATTAACAGTGACTATAGCAAGAGAAAGCTTCTTGGCATTCACGAAAATGTGAGGGTACTACGCTATCCTGATCACTTTTCTTCTGGTGTTTACCTGTGGTCACACCATGAAAAACTTGTCATTGTTGATCACCAGATTTGTTTTATTGGAGGATTGGATTTATGCTTTGGTCGTTACGATACATCTGAACACACAGTGGGAGATTCCCCTCCCCTGATATGGCCAGGAAAGGACTATTATAATCCTAGGGAATCCGAGCCAAATTCATGGGAAGATTCAATGAAAGATGAATTTGATCGTGTAAAATATCCTCGAATGCCATGGCATGATGTTCATTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCATTTTGTTCAGCGATGGAATTATGCAAAGAGGAACAAAGCTCCAAATGAGCAAGCAATTCCTTTACTCATGCCCCAGCATCATATGGTTATCCCACACTACTTGGGAAGAAGCAAAGAGGTGGAGATTGAAAGCAAGAATACTGACGATCATATAGGCATGAAGAGGGGAGATTCCTTTTCCTCACCCCAAGATGTTCCTCTCCTTTTACCTGAGGACTCCGGTGGGATGGATGCTCCTTTAGGAGATACAGCATTGAATGAGTTAAGCTCCTTTCTACATCACCTTGACCGGCCAACCAGGGTCAGCAGTGGTCGTCCTTTTTCTTTCCGGAAGGCCAAAATTGAACCAATAAGTTCTGATACACCAATGAAGGGCTTTGTAGACGATCTTGACTCAGTGGATCATCATGGGAAGATGCCTATGGATAGAGTAGCTCACATTAGTGTACACAATTCAGGTCCAGAATGGTGGGAGACACAAGAACGTGGTGACCAAGGAAGTTTTGCAGATGAATCTGGCGAAGTTGGTCCTCGTGTATCCTGCCATTGTCAGGTTATTCGGAGTGTTAGTCAATGGTCTGCTGGAACTAGCCAAACAGAAGATAGTATCCACAATGCTTATTGCTCTCTTATTGACAAAGCAGAACACTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCAGGAGATGAGATGATACGAAATCGTGTTTTGGAAGCTTTATATCGACGGATTATGCGAGCTTACCATGACAAAAAATCATTTAGGGTCATAATTGTCATACCCCTCCTGCCTGGCTTCCAGGGAGGCCTGGATGATAGCGGTGCGGCATCCGTCAGAGCAATAATGCATTGGCAGTATCGAACCATTTGCAGAGGACAAAACTCTATATTACATAATCTATTAGAAATTCTTGGTTCAAAAATACATGATTACATCTCTTTCTATGGCCTTAGGGCTTATGGTAGACTCTTTGATGGTGGTCCTGTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGACTGTACAACTTTGATTGGATCTGCAAATATTAATGATAGGAGTTTACTTGGCTCCAGAGATTCTGAGATTGGTGTAATTATAGAAGACAAAGAATTGATCAATTCTTTTATGGGGGGAAAATCATGGAAAGCAGGAAAATTCTCTCTGACTCTGCGGTTGTCATTATGGTCTGAACACTTAGGCCTGCAAGCAGGGGAGATCAATCAAATAATGGACCCAATTGCTGAGTCAACATATAAGGATATTTGGATGGCGACAGCGAAGACAAATACTGCAATTTATGAGGATGTTTTTTCTTGTGTACCTAATGATCTGATACACACCAGACTTGCTTTCAGGCAAAGCACAGCTATCTGGAAAGAAAGAATTGGCCATACTACCATTGATTTAGGAATAGCCCCAGAAAATTTAGAATCCTATCAAGATGGAGGTATCAAGAAAACTGACCCTTTGGAAAGATTGGCATCAGTGAAGGGTCATCTTGTTTCCTTTCCCTTGGAGTTCATGTGTCAAGAAAATCTAAGACCTGCTTTTAATGAAAGCGAATACTATGCTAGCACTCAGGTTTTCCATTGA 3336 0.4239 MATEQLMSGGGPRYVQMQSEHSTAISSSASFRFGGGPEPTRIFDELPEAIIVSVSRPDAGDISPMLLSYTIEFRYKQFKWQLAKKASHVFYLHFTLKKRAFIEEIHEKQEQVKEWLNNLGIVEHTAVVQDDDEAEDETVHLHHDESAKDRDVPSSAALPIIRPAIGRQDIMSDRAKTAMQGYLNHFLGNINIVNSPEVCKFLEVSKLSFTPEYGPSLKEDYVMVKHLPTVPKDDDSRKCCSSRCFNCCNDNWPKVWAVLKPGFLALLADPFDSQPLDIIVFDVLPASDGNGDGRLSLAKEIKERNPLRHSFKVTCGNRSIRIRVKSSGKVKDWVAAINDAGLRPPEGWCHPHRHGSFAPPRGLIEDGSQAQWFVDGRAAFEAIASSIEDAKSEIFICGWWVCPELYLRRPFHSHASSRLDNLLEEKAKQGVQIYILLYKEVALALKINSDYSKRKLLGIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTSEHTVGDSPPLIWPGKDYYNPRESEPNSWEDSMKDEFDRVKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLGRSKEVEIESKNTDDHIGMKRGDSFSSPQDVPLLLPEDSGGMDAPLGDTALNELSSFLHHLDRPTRVSSGRPFSFRKAKIEPISSDTPMKGFVDDLDSVDHHGKMPMDRVAHISVHNSGPEWWETQERGDQGSFADESGEVGPRVSCHCQVIRSVSQWSAGTSQTEDSIHNAYCSLIDKAEHFIYIENQFFISGLSGDEMIRNRVLEALYRRIMRAYHDKKSFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLLEILGSKIHDYISFYGLRAYGRLFDGGPVATSQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEIGVIIEDKELINSFMGGKSWKAGKFSLTLRLSLWSEHLGLQAGEINQIMDPIAESTYKDIWMATAKTNTAIYEDVFSCVPNDLIHTRLAFRQSTAIWKERIGHTTIDLGIAPENLESYQDGGIKKTDPLERLASVKGHLVSFPLEFMCQENLRPAFNESEYYASTQVFH 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00404 1111 Gene3D Endonuclease Chain A 364 600 - -
Accr1g00404 1111 CDD PLDc_vPLD1_2_yPLD_like_1 370 514 - -
Accr1g00404 1111 FunFam Phospholipase 741 961 - -
Accr1g00404 1111 SUPERFAMILY PH domain-like 215 340 - -
Accr1g00404 1111 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 477 504 IPR001736 GO:0003824
Accr1g00404 1111 PIRSF PLD_euk 604 1111 IPR016555 GO:0004630|GO:0006654|GO:0048017
Accr1g00404 1111 PIRSF PLD_euk 52 622 IPR016555 GO:0004630|GO:0006654|GO:0048017
Accr1g00404 1111 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 907 934 IPR001736 GO:0003824
Accr1g00404 1111 Pfam Phospholipase D Active site motif 477 504 IPR001736 GO:0003824
Accr1g00404 1111 SUPERFAMILY Phospholipase D/nuclease 748 956 - -
Accr1g00404 1111 CDD PLDc_vPLD1_2_yPLD_like_2 767 951 - -
Accr1g00404 1111 Pfam PLD-like domain 780 955 IPR025202 -
Accr1g00404 1111 SUPERFAMILY Phospholipase D/nuclease 327 596 - -
Accr1g00404 1111 CDD PH_PLD 193 340 - -
Accr1g00404 1111 SMART PH_update 216 344 IPR001849 -
Accr1g00404 1111 Coils Coil 98 118 - -
Accr1g00404 1111 Gene3D - 242 342 IPR011993 -
Accr1g00404 1111 Gene3D Endonuclease Chain A 701 968 - -
Accr1g00404 1111 PANTHER PHOSPHOLIPASE D 168 1100 IPR015679 -
Accr1g00404 1111 SMART pld_4 477 504 IPR001736 GO:0003824
Accr1g00404 1111 SMART pld_4 907 934 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00404 Accr-Chr1 7751364 7764075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00404 1 991 Phospholipase D Gene Family (Wang group) AT3G16785 72.500 0.0 1406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00404 K01115 - gmx:100780514 1924.83