Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00403 ATGTGTGGAGGTGCTATCATCTCCGACTTCGTCCCTCCGAAACCTGGTGGTCGAAAATCGACCACCACCAACGACTTCTGGTCGGAGCTTGAAACCTTTGCTGAGTTCCTAGGATTCCATCCCTCTGCTCTTTCTCCACATCACCAGAAACCAGCTGTTGCTTCCCCTGATGATCAGAATCTCCCTCTCATCCCAACTGTGACATGTGAGAATAATAACAAAAATGACAATACCAACAACAACAAGAAGAAGCCGGAGAAGAAAAGTGGAGGTGGAGGAAGGACTCGCAAGAACATTTACAGAGGAATCCGGCAAAGGCCGTGGGGCAAGTGGGCCGCCGAGATAAGGGACCCACACAAGGGCGTCCGAGTCTGGCTCGGCACCTTCAACACCGCAGAAGAAGCCGCCAGAGCATATGATCAAGCCGCCAAGCGCATCCGCGGCGACAAAGCCAAGCTCAACTTCCCGCTGGCTCCTCCTCCTCCAGCTCCGGCGCCAGCTCCCCTGGAGCCGCCCCAGAAGAAGCAGTGCCTTGCCCCCGGCCACAACGACGCCGTTCAGCTCAACCAACAGCAAATCTCAACCCTCGAATCCTTCCTCGGTCTGGACGAGGACAACAACAACAAGAACAACGCTACTTATGGTGTTTCGCAGCCGATCGGAGCAGCCGCAGGCAGTGGCAGCGTACTCTCTGAGTGGGACCCCATGGATGATCTCTGGATGCTCAACGACGTCGTTATGCATCAACCGAATCATCATAACGGCCACTTCTAG 774 0.5504 MCGGAIISDFVPPKPGGRKSTTTNDFWSELETFAEFLGFHPSALSPHHQKPAVASPDDQNLPLIPTVTCENNNKNDNTNNNKKKPEKKSGGGGRTRKNIYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFNTAEEAARAYDQAAKRIRGDKAKLNFPLAPPPPAPAPAPLEPPQKKQCLAPGHNDAVQLNQQQISTLESFLGLDEDNNNKNNATYGVSQPIGAAAGSGSVLSEWDPMDDLWMLNDVVMHQPNHHNGHF 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00403 257 CDD AP2 99 155 IPR001471 GO:0003700|GO:0006355
Accr1g00403 257 MobiDBLite consensus disorder prediction 77 93 - -
Accr1g00403 257 PRINTS Ethylene responsive element binding protein signature 122 138 IPR001471 GO:0003700|GO:0006355
Accr1g00403 257 PRINTS Ethylene responsive element binding protein signature 100 111 IPR001471 GO:0003700|GO:0006355
Accr1g00403 257 FunFam Ethylene-responsive transcription factor 2 98 157 - -
Accr1g00403 257 PANTHER DNA-BINDING DOMAIN 59 191 IPR044808 GO:0003700|GO:0009873
Accr1g00403 257 MobiDBLite consensus disorder prediction 46 97 - -
Accr1g00403 257 SMART rav1_2 99 162 IPR001471 GO:0003700|GO:0006355
Accr1g00403 257 MobiDBLite consensus disorder prediction 61 76 - -
Accr1g00403 257 ProSiteProfiles AP2/ERF domain profile. 99 156 IPR001471 GO:0003700|GO:0006355
Accr1g00403 257 SUPERFAMILY DNA-binding domain 99 157 IPR016177 GO:0003677
Accr1g00403 257 Gene3D AP2/ERF domain 99 158 IPR036955 GO:0003700|GO:0006355
Accr1g00403 257 MobiDBLite consensus disorder prediction 1 23 - -
Accr1g00403 257 Pfam AP2 domain 100 148 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00403 Accr-Chr1 7648126 7649707 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00403 1 246 AP2-EREBP Transcription Factor Family AT3G16770 40.559 6.40e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr1g00403 AP2 4.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00403 K09286 - gmx:100817253 190.66