Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00402 ATGTGTGGAGGTGCTATCATCTCCGACTTCGTCCCTCCGAAACCTGGTGGTCGAAAATCGACCACCACCAACGACTTCTGGTCGGAGCTTGAAACCTTTGCTGAGTTCCTAGGATTCCATCCCTCTGCTCTTTCTCCACATCACCAGAAACCAGCTGTTGCTTCCCCTGATGATCAGAATCTCCCTCTCATCCCAACTGCAGTGACATGTGAGAATAATAACAAAAATGACAATACCAACAACAACAAGAAGAAGCCGGAGAAGAAAAGTGGAGGTGGAGGAAGGACTCGCAAGAACATTTACAGAGGAATCCGGCAAAGGCCGTGGGGCAAGTGGGCCGCCGAGATAAGGGACCCACACAAGGGCGTCCGAGTCTGGCTCGGCACCTTCAACACCGCAGAAGAAGCCGCCAGAGCATATGATCAAGCCGCCAAGCGCATCCGCGGCGACAAAGCCAAGCTCAACTTCCCGCTGGCTCCTCCTCCTCCAGCTCCGGCGCCAGCTCCCCTGGAGCCGCCCCAGAAGAAGCAGTGCCTTGCCCCCGGCCACAACGACGCCGTTCAGCTCAACCAACAGCAAATCTCAACCCTCGAATCCTTCCTCGGTCTGGACGAGGACAACAACAACAAGAACAACGCTACTTATGGTGTTTCGCAGCCGATCGGAGCAGCCGCAGGCAGTGGCAGCGTACTCTCTGAGTGGGACCCCATGGATGATCTCTGGATGCTCAACGACGTCGTTATGCATCAACCGAATCATCATAACGGCCACTTCTAG 777 0.5508 MCGGAIISDFVPPKPGGRKSTTTNDFWSELETFAEFLGFHPSALSPHHQKPAVASPDDQNLPLIPTAVTCENNNKNDNTNNNKKKPEKKSGGGGRTRKNIYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFNTAEEAARAYDQAAKRIRGDKAKLNFPLAPPPPAPAPAPLEPPQKKQCLAPGHNDAVQLNQQQISTLESFLGLDEDNNNKNNATYGVSQPIGAAAGSGSVLSEWDPMDDLWMLNDVVMHQPNHHNGHF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00402 258 PRINTS Ethylene responsive element binding protein signature 101 112 IPR001471 GO:0003700|GO:0006355
Accr1g00402 258 PRINTS Ethylene responsive element binding protein signature 123 139 IPR001471 GO:0003700|GO:0006355
Accr1g00402 258 PANTHER DNA-BINDING DOMAIN 60 192 IPR044808 GO:0003700|GO:0009873
Accr1g00402 258 Gene3D AP2/ERF domain 100 159 IPR036955 GO:0003700|GO:0006355
Accr1g00402 258 SUPERFAMILY DNA-binding domain 100 158 IPR016177 GO:0003677
Accr1g00402 258 MobiDBLite consensus disorder prediction 69 98 - -
Accr1g00402 258 CDD AP2 100 156 IPR001471 GO:0003700|GO:0006355
Accr1g00402 258 MobiDBLite consensus disorder prediction 78 94 - -
Accr1g00402 258 MobiDBLite consensus disorder prediction 1 23 - -
Accr1g00402 258 FunFam Ethylene-responsive transcription factor 2 99 158 - -
Accr1g00402 258 ProSiteProfiles AP2/ERF domain profile. 100 157 IPR001471 GO:0003700|GO:0006355
Accr1g00402 258 Pfam AP2 domain 101 149 IPR001471 GO:0003700|GO:0006355
Accr1g00402 258 SMART rav1_2 100 163 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00402 Accr-Chr1 7648126 7649707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00402 1 247 AP2-EREBP Transcription Factor Family AT3G16770 40.418 7.77e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr1g00402 AP2 4.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00402 K09286 - gmx:100817253 190.66