Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00393 ATGGTGAGGCTTGATAGAGCAGGAACAAACAAGAGCTTAGAGAGTTTATTGGAGTTGAACCAGATTGAGGCGGCGACGGCGGCGGCGAATAAGAAGCTGAGAGCCCAGAAGTCAATTCCTGGGTATGGCTTGGAGTTCAATAATCTGTCATATAGTGTGGTGAAGAAGGTGAAGAAAGATGGGGCTTTGGTTAAGAAAGAGGCTTATCTTCTTCATGATATATCTGGTCAAGCTATGAGAGGTGAAGTTATGGCCATTATGGGACCTAGTGGCGCTGGTAAGTCCACTTTTCTTGATGCTTTGGCTGGTCGAATTGCACAAGGCAGCTTAGAAGGATCCGTCAGAATTGATGGAAAACCAGTGACAGCAAGTTACATGAAGATGGTGTCGTCTTATGTAATGCAAGAAGATCAGCTGTTTCCTATGTTGACTGTTTTTGAGACATTTATGTTCGCAGCGGAGGTTAGGCTTCCTCCTTCTATTTCGAGAGAGGAAAAGAAGAAGAGGGTTTATGAGCTCCTTGATCAGCTTGGCTTGCAGAGCGCAACACAGACATATATTGGTAATGAGGGGAAGAGAGGAGTGTCAGGAGGAGAAAGAAGAAGGGTATCCATTGGCGTGGACATAATCCATAAGCCATCACTTCTGTTTCTGGATGAACCAACGTCAGGTCTTGATTCCACAAGTGCTTATAGTGTCGTTGAAAAGGTTAAGGACATAGCTCGCTCCGGAAGCATCGTCCTCATGACCATTCATCAACCTTCCTACAGAATTCAAATGCTCCTAGACCGACTCACCATCCTCGCAAGGGGAAGATTGATATACCTGGGCACGCCAAGTGCACTTTCATCTCATCTTTCTGGGTTTGGAAGCCCAGTGCCTGAGGGAGAGAACAGTTTGGAGTATCTTTTAGATGTCATAAAAGAATATGACGAATCCAACGTTGGACTCGACCCACTTGTTCTCTATAATCGTGACGGCCTGAAACTTGATCATTACCAAGCAGCCAAAACACCACTTGTTAAAACCCCAAGAACTATTTACAAAAAGAGCAACAACACACCTGCCTCAAAGCACATGATTAGCCTAAAATCCGAAGGCTTCAAAACTGGAAAAACACCAACACAGCCTGCAGATTCTTCGCAGTTCAGTTATAACATCGACGATGACCTCGATGACGACAACGAGGATTTCGATAACTCTCTTGAAAGGAAAAGTACCATCCACACACCAAGGGCTATTAACACCATGATTAGTGGTGTCTATCCTCCTTTGGCTTCTCAGTTTTATAAGGATTTCTCTGCTAAAGACTTCTCTGTTTGGCTTTACCACGGCATGGTCGGGAGCCCCCGCCGCCCGTCTTGGACTCCGGCGAGAACACCGAGAACTCCAATGTCAGGACCAAGTAGCACCGTTTTTAATAACCAGTATTCAACATCATACGAGGATCCGCAACAGAATTATTATCATCATCAAGCCAAAACACCATCCATGGTTAGCCAATCCGTTGCCTTGGACTCGTACGTAAGCTCGTACGAGGAATTCGACATCGAAGTTCTGGATGAGCCCAACCATGGACCAAAGTACGCTAATCCATGGCTTCGTGAGGTTTTAGTACTTTCATGGAGAACTGTTTTAAACGTGATTCGAACTCCAGAATTGTTCCTTTCACGTGAGATTGTTCTAACAGTTATGGCTCTTGTTCTCTCCACAATCTTCAAAAACCTAGGCCATACCACTTTCAAGGACATTAATAGGATCCTCAACTTCTACATCTTCTCTGTGTGCCTCGTCTTCTTCTCATCAAACGACGCCGTTCCGTCCTTCATCCTCGAGAGATTCATCTTCATAAGAGAAACCTCACACAATGCTTATCGTGCTTCTTCTTACGTCATCTCTTCCCTCATTGTTTATCTCCCGTTTTTCGCAGTACAAGGCTTCACTTTCGCTCTCATAACCAAATTCATGCTTAAGCTGAAAGGCGGTCTCTTGTATTTTTGGTTGACTCTCTTCACTTCCCTCATCACCACTAATGCTTATGTCATGCTGGTTAGCGCTCTCGTTCCTAGTTACATCACGGGCTACGCCGTGGTGATCGCCACCACGGCGTTGTTCTTCCTCACCTGTGGCTTCTTCCTCAAGCGAACTCAGATTCCTTTATACTGGCGATGGCTTCACTATCTATCGGCCATAAAGTACCCGTACGAGGCTTTGTTAACTAATGAGTTTCATAATGAACGGTGCTACACAGGGAGCTTGTCTGATTTATCGCCTGGGCCATTGGGAAAGGTGAAGCCGAGTGAAGGACATGACCGGTCCAACTGTCCGAGCGGCTTACTCGGAGAAGATATTTTGGCCACCATGGATATTCAGATAGAGAAGATTTGGTTTGATATAGTTATCCTTCTGGCTTGGGGTGTTCTTTACAGGTTCTTCTTTTATTTGGTTTTGAGATTTTATTCTAAGAATGAGAGGAAGTAA 2481 0.4498 MVRLDRAGTNKSLESLLELNQIEAATAAANKKLRAQKSIPGYGLEFNNLSYSVVKKVKKDGALVKKEAYLLHDISGQAMRGEVMAIMGPSGAGKSTFLDALAGRIAQGSLEGSVRIDGKPVTASYMKMVSSYVMQEDQLFPMLTVFETFMFAAEVRLPPSISREEKKKRVYELLDQLGLQSATQTYIGNEGKRGVSGGERRRVSIGVDIIHKPSLLFLDEPTSGLDSTSAYSVVEKVKDIARSGSIVLMTIHQPSYRIQMLLDRLTILARGRLIYLGTPSALSSHLSGFGSPVPEGENSLEYLLDVIKEYDESNVGLDPLVLYNRDGLKLDHYQAAKTPLVKTPRTIYKKSNNTPASKHMISLKSEGFKTGKTPTQPADSSQFSYNIDDDLDDDNEDFDNSLERKSTIHTPRAINTMISGVYPPLASQFYKDFSAKDFSVWLYHGMVGSPRRPSWTPARTPRTPMSGPSSTVFNNQYSTSYEDPQQNYYHHQAKTPSMVSQSVALDSYVSSYEEFDIEVLDEPNHGPKYANPWLREVLVLSWRTVLNVIRTPELFLSREIVLTVMALVLSTIFKNLGHTTFKDINRILNFYIFSVCLVFFSSNDAVPSFILERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGFTFALITKFMLKLKGGLLYFWLTLFTSLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPLYWRWLHYLSAIKYPYEALLTNEFHNERCYTGSLSDLSPGPLGKVKPSEGHDRSNCPSGLLGEDILATMDIQIEKIWFDIVILLAWGVLYRFFFYLVLRFYSKNERK 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00393 826 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524|GO:0016887
Accr1g00393 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 286 IPR027417 -
Accr1g00393 826 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 44 295 IPR003439 GO:0005524
Accr1g00393 826 FunFam ABC transporter G family member 6 59 286 - -
Accr1g00393 826 Pfam ABC transporter 71 223 IPR003439 GO:0005524
Accr1g00393 826 Pfam ABC-2 type transporter 536 743 IPR013525 GO:0016020|GO:0140359
Accr1g00393 826 SMART AAA_5 80 280 IPR003593 GO:0016887
Accr1g00393 826 MobiDBLite consensus disorder prediction 451 470 - -
Accr1g00393 826 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 24 813 - -
Accr1g00393 826 Gene3D - 43 289 IPR027417 -
Accr1g00393 826 CDD ABCG_EPDR 44 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00393 Accr-Chr1 7519505 7523184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00393 81 284 Calmodulin-binding Proteins AT2G36910 26.570 1.74e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00393 K05681 - gmx:100819497 1172.92