Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00390 ATGATAATGCAGCTTCATAAACCCTTCATTTTGCTCACTCTCTTCCTGGTTTTGCTTCCTCTCGTAAAACCGGATCTGGCTTCTGAGAAACTCGCTCTCGTCTCTTTCCGTTCGGCCGTTGGAGGCCGAACCCTATTTTGGAACGTTTCAGAGCAGAGTCCATGCAACTGGTTCGGAGTTCACTGCAAAAACGACGTCGTCGTCCAGCTTCATCTTCCCGGCTTTGCACTTTCCGGCTCAATACCTACCGGCATTTTCGGCAACTTGACTCATCTTCGAGCCCTGAGCTTGCGTTTCAATGCTCTGAAAGGTGTGCTTCCTCAAGATCTCGCTTCTTGTGTAAATCTTCGTAGCCTTTACTTGCAACAGAATCTTCTCTCCGGTGAAATTCCAGAATCCCTGTTTGCTTTACATCACTTGTTCCAGCTTAACTTGGCTTCCAACAAATTTTCTGGTTCAATTCCGCTGGGTTTCAACAATTTGACGAGGCTGAGAGCTTTGTTCCTTGAAAATAACAATCTCTCTGGTGCTATTCCCCAGTTAAACCTTGTAAAGCTTGAACAATTCAATGTCTCAAACAATATGCTGAATGGTTCTATTCCAGAAAGGTTACAAACTTTCTCAAGAAATTCGTTTCTAGGAAACTCTTTGTGTGGGAAACCCCTCAATCTTTGCCCAGGAGATGTAAATGGAACGGGAACGGGAACGGGAACGGGAACTGGAACGGGACCTGGAAACGGAACCAGAGCTGGAGCCGGAAAATCTCCGAAGCCGGAAATTGATAACAATGAGGGAAACATGATGAAGAAGAAGAAACTGTCAGGTGGTGCAATTGCTGGAATCGTTGTAGGATCAGCAGTGTGTCTTCTGTTGATTCTCTTCGCTCTGATCATATTGTGCCGAAAGAGTAGTAATCAGAAGACAAGGTCTCTGGACATTTTAACTGAGAAGCAGCTTGAAGTTTCACAATTGGAACACAGCAATGGCTACTCGGCTGCTGCGGGGGCAACTGTGCCGGTGACAGCGACGGAAGCCAGTGCCGGAGCGAAAAAGCTGGTATTTTTCGGTCATTCACCGAGGGTATTTGATCTTGAGGACTTGCTTAGGGCTTCTGCCGAAGTTTTGGGTAAAGGCACATTTGGAACAGCTTATAAGGCGACTATGGAGGATGGGCCTGTGGTGGCGGTGAAGCGATTGAGGGATGTGACGATTTCTGATTCAGAGTTCAAGGAGAAGATTGAAGCAGTAGGAGCAATGGATCATGAGAATTTGGTGCCTCTCAAGGCTTACTACTATAGCAGAGAAGAAAAGCTTCTTGTCTATGATTACCTACCCACAGGAAGTTTGTCTGCACTTTTGCATGGAAACAAAGGGACTGGTAGGAACCCACTGAATTGGGAAGTCAGATCAGGCATTGCTCTTGGAGCTGCTAGAGGCATTGAGTACTTACACTTACAAGGGACTAATGTTTCTCATGGAAACATAAAGGCGTCCAACATCCTCCTCTCCAGATCATTGGATGCTAAAGTCTCTGACTTTGGCCTCACGCACCTTGCCAGTCCCACCTCCTCCACTCCAAACCGAGTTACTGGGTACCGTGCTCCTGAGGTAACCGATCCTCGCAAAGTATCTCAAAAAGCAGATGTTTATAGCTTTGGAGTGTTACTCTTGGAATTGCTTACTGGGAAGGCTCCGGCCCATGCCCTCTTGAACGATGAAGGAATAGACCTCCCTAGATGGGTTCAATCTGTTGTTAGAGAAGAGTGGACCTCCGAGGTGTTTGATGTCGAGCTTCTTAGGCATCAAAATGTTGAGGATGAGATGGTTCAGTTGTTGCAACTCGCAGTGGATTGTGTCGCTCCGTACCCAGATAATCGCCCATCGATGTCGGAAGTGACAAAGCGCATTGAGGAGTTACGACGTGATCAAGACCTAGCCCAGAATCCCGATCAGATCAAGGATATAGATGATATATCTTCTCACTGA 1986 0.4673 MIMQLHKPFILLTLFLVLLPLVKPDLASEKLALVSFRSAVGGRTLFWNVSEQSPCNWFGVHCKNDVVVQLHLPGFALSGSIPTGIFGNLTHLRALSLRFNALKGVLPQDLASCVNLRSLYLQQNLLSGEIPESLFALHHLFQLNLASNKFSGSIPLGFNNLTRLRALFLENNNLSGAIPQLNLVKLEQFNVSNNMLNGSIPERLQTFSRNSFLGNSLCGKPLNLCPGDVNGTGTGTGTGTGTGPGNGTRAGAGKSPKPEIDNNEGNMMKKKKLSGGAIAGIVVGSAVCLLLILFALIILCRKSSNQKTRSLDILTEKQLEVSQLEHSNGYSAAAGATVPVTATEASAGAKKLVFFGHSPRVFDLEDLLRASAEVLGKGTFGTAYKATMEDGPVVAVKRLRDVTISDSEFKEKIEAVGAMDHENLVPLKAYYYSREEKLLVYDYLPTGSLSALLHGNKGTGRNPLNWEVRSGIALGAARGIEYLHLQGTNVSHGNIKASNILLSRSLDAKVSDFGLTHLASPTSSTPNRVTGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPAHALLNDEGIDLPRWVQSVVREEWTSEVFDVELLRHQNVEDEMVQLLQLAVDCVAPYPDNRPSMSEVTKRIEELRRDQDLAQNPDQIKDIDDISSH 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00390 661 Pfam Protein kinase domain 372 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00390 661 Gene3D Transferase(Phosphotransferase) domain 1 444 659 - -
Accr1g00390 661 Pfam Leucine rich repeat 80 126 IPR001611 GO:0005515
Accr1g00390 661 SUPERFAMILY L domain-like 45 207 - -
Accr1g00390 661 Gene3D Ribonuclease Inhibitor 138 225 IPR032675 -
Accr1g00390 661 FunFam pollen receptor-like kinase 1 340 443 - -
Accr1g00390 661 Gene3D Ribonuclease Inhibitor 29 137 IPR032675 -
Accr1g00390 661 FunFam Probable inactive receptor kinase At1g48480 444 648 - -
Accr1g00390 661 ProSitePatterns Protein kinases ATP-binding region signature. 375 397 IPR017441 GO:0005524
Accr1g00390 661 Gene3D Phosphorylase Kinase; domain 1 337 443 - -
Accr1g00390 661 MobiDBLite consensus disorder prediction 235 267 - -
Accr1g00390 661 PANTHER OS05G0588300 PROTEIN 10 643 - -
Accr1g00390 661 FunFam Probable inactive receptor kinase RLK902 26 182 - -
Accr1g00390 661 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Accr1g00390 661 ProSiteProfiles Protein kinase domain profile. 369 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00390 661 SUPERFAMILY Protein kinase-like (PK-like) 373 636 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00390 Accr-Chr1 7496394 7499132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00390 25 656 Receptor kinase-like Gene Family AT1G48480 59.627 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr1g00390 Pkinase 8.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00390 - - pcin:129292246 1020.76