Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00381 ATGAGTGGTGATAAAAGAGAAGAATATTCTGCATTATCTGAGAAAGATGAAGAAGAAGTAGATAATATCGAAGAGAAAGATAATGAGATCCTCAAAAGCAGAGTCTCTAACCATCCTCTCTTTGATCTTCTCGTTGAACAACACCTCAACTGTTTGAAGGTGGCGGGTGACATTTCCAACCTAGAAAAGGTCAAGAAGAAGATAGATAGAAAGAAGAACGCAATGAAGAAGCAAAACCTTGGCATGTTTAATCATTCAGAGCTGGATCACTTCATGGAAGCATATTGTATGGCACTAGGGAAGCTGAAAGAAGCAATGGAGGAGCCTCAAACGGAGTCATTGGCTTTCATCAACAACATGCATTCTCAACTCACAGACCTCACTGATGGATTGACTCTCTCTTCTCCTTCTTCTTCTACTTCCAAACACAACCTTAAAGATGGCATCTGA 450 0.4022 MSGDKREEYSALSEKDEEEVDNIEEKDNEILKSRVSNHPLFDLLVEQHLNCLKVAGDISNLEKVKKKIDRKKNAMKKQNLGMFNHSELDHFMEAYCMALGKLKEAMEEPQTESLAFINNMHSQLTDLTDGLTLSSPSSSTSKHNLKDGI 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00381 149 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 8 129 - -
Accr1g00381 149 MobiDBLite consensus disorder prediction 128 149 - -
Accr1g00381 149 SMART KNOX1_2 29 70 IPR005540 GO:0003677|GO:0005634
Accr1g00381 149 Pfam KNOX2 domain 86 128 IPR005541 GO:0003677|GO:0005634
Accr1g00381 149 SMART KNOX2_2 78 129 IPR005541 GO:0003677|GO:0005634
Accr1g00381 149 Coils Coil 6 26 - -
Accr1g00381 149 Coils Coil 58 78 - -
Accr1g00381 149 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00381 Accr-Chr1 7406323 7408093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00381 30 141 Homeobox Transcription Factor Family AT1G70510 31.092 1.47e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00381 - - gmx:100790124 138.658