Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00380 ATGGCCGTCGTCCGTCAACGCCGGCAACTCAACCTTTCCCTGGCGCTGCCGGAGCCCTCTGAAAGCCGCCGTCTCTTCCTCCTCCCCACCGTCTCCTCCTCCTCCTCCGCCGCAGACATCACCCTTAACGACATCGAAAAGCTTGAAGTTCTTGGCCACGGAAATGGTGGTACAGTCTATAAGGTTCGACACAAGCGAACTTCTGCTATCTACGCCCTGAAGGTCGTCCACAACAGCTCCGACCCGATAAGCTGCCGGCAAGTCCGGCGAGAGATGGACATCCTCCGACGGACGGACTCGCCGTACGTAGTAAAATTACACGGTTTCTTCGAGAAGCCGTCCGGCGACGTAGCGATTTTGCTAGAGTACATGGACTTGGGGACGCTGGACACACTATTAAAGAACAACGGCACCTTCTCTGAATCCCAACTCGCCGCGGTGGCGCGTCAAGTTCTCAACGGGCTGAGCTACCTCCACGCGAACAAGATCATCCACCGTGATATCAAGCCGTCGAATCTTCTGGTGAATCGGGATATGGAAGTGAAGATCAGTGACTTCGGAGTGAGCAAGGTCATGTGCCGGACGCTGGATGCGTGTAATTCATACGTGGGTACATGCGCGTACATGAGCCCGGAACGGTTCGACCCGGATAGATATGGAGGGAATTATGACGGGTATGCGGCGGATATATGGAGCTTGGGTCTCACGTTGTTCGAACTCTATGTGGGTCATTTTCCGTTTCTATCGGAGGGTCAGAGACCCGATTGGGCCACCTTGATGTGTGCCATTTGTTTTAGCGACCCGCCTAACTTGCCAGAGAGCGCTTCCGACGAGTTTCAGAGTTTCATGGAGTGTTGCTTGAAGAAGGAATCAAATGAGAGGTGGACGGCGGCTCAGCTTTTGACCCACCCATTTCTACGTCAATAA 927 0.5415 MAVVRQRRQLNLSLALPEPSESRRLFLLPTVSSSSSAADITLNDIEKLEVLGHGNGGTVYKVRHKRTSAIYALKVVHNSSDPISCRQVRREMDILRRTDSPYVVKLHGFFEKPSGDVAILLEYMDLGTLDTLLKNNGTFSESQLAAVARQVLNGLSYLHANKIIHRDIKPSNLLVNRDMEVKISDFGVSKVMCRTLDACNSYVGTCAYMSPERFDPDRYGGNYDGYAADIWSLGLTLFELYVGHFPFLSEGQRPDWATLMCAICFSDPPNLPESASDEFQSFMECCLKKESNERWTAAQLLTHPFLRQ 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00380 308 CDD PKc_MAPKK_plant_like 43 308 - -
Accr1g00380 308 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Accr1g00380 308 ProSiteProfiles Protein kinase domain profile. 45 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00380 308 Gene3D Transferase(Phosphotransferase) domain 1 127 308 - -
Accr1g00380 308 Gene3D Phosphorylase Kinase; domain 1 18 125 - -
Accr1g00380 308 FunFam Mitogen-activated protein kinase 2 126 308 - -
Accr1g00380 308 SUPERFAMILY Protein kinase-like (PK-like) 42 307 IPR011009 -
Accr1g00380 308 Pfam Protein kinase domain 46 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00380 308 SMART serkin_6 45 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00380 308 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Accr1g00380 308 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 32 308 - -
Accr1g00380 308 FunFam Mitogen-activated protein kinase kinase 1 28 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00380 Accr-Chr1 7392812 7393738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00380 1 308 MAP Kinase Kinase Gene Family AT1G73500 63.462 3.59e-138 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Accr1g00380 Pkinase 1.7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00380 K20604 - qsa:O6P43_008459 499.204