Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00371 ATGAGAAGACAAGAAGAAGAAGAAGACGACGATGAAGAAGAGTGCAACGCCGGCGCCAGAAAGCAGACACGCAACAGATTTCGATTTCGACCTCGTTTCTATTTGTGTTTCGCCGATCCCCATTCCACTTGGCGAGCCGGCACCTCCGCACAAGGCGGCGGAGTTGGCGGCGCCACCCCTAATCTCCGCCCCCGGTTCCTCATTCATCCAGATAACGGATGGTACTTCTTGTGGAAGCATTTCATTCTGATATGGGCAGTGTACTCTTCCTTCGTCACTCCTCTGGAGTTCGGATTCTTCAGAGGCTTGCCGGAGAAAGTCTTCTTGCTCGACATCGCCGGCCAGTTTGCTTTCCTCGTAGACATCGCCGTCCGATTCTTCGTAGCCTATCGTGACATCCAATCCTATTGCCTGGTCTACAATCACACTCAGATTGCCAAAAGGTACCTGAAGTCTCGGTTCATAGTTGATTTTCTTAGCTGTCTTCCGTGGGATTATATTTACAAGGCTACAGGGAGGAAAGAAGCCGTCAGGTATTTTTTATGGATTAGGCTAAGTCGAGCGTGTAGAGTGACTGAGTTTTTTGAGAGGCTGGAGAAAGATATTAGGATCAATTACCTGTTTACCAGAATCGCAAAACTTCTTGTTGTAGAACTTTATTGCACCCACACAGCTGCCTGTATCTTCTACTATCTTGCTACCACTTTGCCTCCATCAGATGAAGGTTATACATGGATAGGCAGCTTAAAGATGGGTGATTATAGCTATACAGACTTTAGACATATCGATCTATGGAAGCGTTATGTGACATCACTCTACTTTGCAATTGTGACTATGGTAACTGTCGGCTACGGGGACATTCATGCTGTCAATGTCAGGGAAATGATATTTGTCATGATTTATGTCTCCTTTGATATGATTCTTGGTGCGTACCTTCTTGGTAATATGACAGCATTGATTGTGAAAGGATCAAAAACAGAGAAGTTTAGGGATAAAATGGCTGATATTATTAAGTTCATGAATAGAAACAACTTGGACAAGCAGATAACCAAAGCGATAAAACGCCATTTACGATTACAGTATGGTTGCAGTTACACTGAGGCTGCTGTGCTTCAGGATATTCCAGCCTCTATTCGTGCAAAGATTTCAGAGAATTTATATGAGCGATTTATACAAAAAGTTCCTCTTTTCAAGGGATGCTCTTTGGCGTTCATTAAGCAAATTGCAATCAGAGTCCATGAAGAGTTCTACCTTCCAGAAGAAGTGATTACGGAGCAAGGAAATGTGGCCAATCAACTTTACCTTGTATGCGATGGTGAGCTGGTTGAGATGAGGACAGAAGATGTTGATAAAGAAGTGTTCATAAAACGTTTGCAAATCTACTCTTCCTTTGGCGAGGTTTCTTTTCTTTGTGATATACCTCAACCTTCAACTATACGAGCGCTTGAATTTTGCAAGGTTTTGCGACTTGATAAGCATTCCTTTATGGAAACACTGAAGTTATATTTTGCAGATGGTCGAGTTATCTTGAACAATTTCCTTGAGGGAAAAGAATCCAGTCTTCAGCAGAAGCTCCTGCAATCAAAAATCTCCTTGACTCTTGAATACCCTGAAATAGAGATGGTTATGAGAATGAATTGTGCTGCATATGAAGGGGACATTTACTTTTTGAAACGTTTGATCGAATCAGGAGCAGATCCCAACAAGACTGGTTATGATGGCAGATCACCCTTGTTTATTTCGGCATCGGAAGGACACGTAGAAATTGTTCGCTTTCTCATTGACCATGGAGTGATTATCAATTTCACTGACAAATTTGGGAACTCCCCCTTGTTTGAAGCCATCAAGAATGGACACGAAGAAGTAGCTTCTTTACTTGTAGAGGCGGGGGCTACTCTTACCGTGGATCATGCTGGGAATTTCCTCTGCATGACTGTTGCAAAGAAGGAGTTGACCCTTCTGCGACTGGTCTTGGATTACGGTATTAATCCGAATGCCAGAAATTATGATCAGCGTACACCTCTTCACATAGCTGCCTCTGAAGGTTTGTGTAAAATGGCCGAGTTGCTTCTACAAGCAGGAGCAAGTGCTTTATCGAAGGACAGATGGGGAAATACACCGCTTGATGATGCTCATATGGGCGGAAATAGGAACGTGATCAAAATGCTGGAAGTTACAAAAATTTCTCAGTTGACTGAATTATCTCACAATATACAAGAACCTCGAGCAAAAGTGCTATTACCATCAAGAGATGAAATTCCAAGAAAGAAATGCAATGTATTTCCTTTCCATCCATGGGATCAGAGAGAGGACAGAAGAGATGGAGTTGTCTTATGGGTTCCAAAAAGCATTGAAGAACTTGTTGAGTTGGCAATGAAACATCTGAACTCTTCAAGTGGTTCCCGTATTTTATCAGAACACGGGTGTAAAATTCTCGATGTAGACATGATTATCAATGATGAGAAGCTATTTCTGGTTAGTGAAGAACAATCAGAGAGTTCATGGATTGATTGA 2514 0.4236 MRRQEEEEDDDEEECNAGARKQTRNRFRFRPRFYLCFADPHSTWRAGTSAQGGGVGGATPNLRPRFLIHPDNGWYFLWKHFILIWAVYSSFVTPLEFGFFRGLPEKVFLLDIAGQFAFLVDIAVRFFVAYRDIQSYCLVYNHTQIAKRYLKSRFIVDFLSCLPWDYIYKATGRKEAVRYFLWIRLSRACRVTEFFERLEKDIRINYLFTRIAKLLVVELYCTHTAACIFYYLATTLPPSDEGYTWIGSLKMGDYSYTDFRHIDLWKRYVTSLYFAIVTMVTVGYGDIHAVNVREMIFVMIYVSFDMILGAYLLGNMTALIVKGSKTEKFRDKMADIIKFMNRNNLDKQITKAIKRHLRLQYGCSYTEAAVLQDIPASIRAKISENLYERFIQKVPLFKGCSLAFIKQIAIRVHEEFYLPEEVITEQGNVANQLYLVCDGELVEMRTEDVDKEVFIKRLQIYSSFGEVSFLCDIPQPSTIRALEFCKVLRLDKHSFMETLKLYFADGRVILNNFLEGKESSLQQKLLQSKISLTLEYPEIEMVMRMNCAAYEGDIYFLKRLIESGADPNKTGYDGRSPLFISASEGHVEIVRFLIDHGVIINFTDKFGNSPLFEAIKNGHEEVASLLVEAGATLTVDHAGNFLCMTVAKKELTLLRLVLDYGINPNARNYDQRTPLHIAASEGLCKMAELLLQAGASALSKDRWGNTPLDDAHMGGNRNVIKMLEVTKISQLTELSHNIQEPRAKVLLPSRDEIPRKKCNVFPFHPWDQREDRRDGVVLWVPKSIEELVELAMKHLNSSSGSRILSEHGCKILDVDMIINDEKLFLVSEEQSESSWID 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00371 837 CDD CAP_ED 396 510 IPR000595 -
Accr1g00371 837 Gene3D - 539 645 IPR036770 -
Accr1g00371 837 ProSiteProfiles Ankyrin repeat profile. 670 702 IPR002110 GO:0005515
Accr1g00371 837 ProSiteProfiles Ankyrin repeat profile. 573 605 IPR002110 GO:0005515
Accr1g00371 837 Gene3D - 77 322 - -
Accr1g00371 837 Gene3D - 646 725 IPR036770 -
Accr1g00371 837 PRINTS EAG/ELK/ERG potassium channel family signature 268 285 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr1g00371 837 PRINTS EAG/ELK/ERG potassium channel family signature 111 121 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr1g00371 837 PRINTS EAG/ELK/ERG potassium channel family signature 220 230 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr1g00371 837 PRINTS EAG/ELK/ERG potassium channel family signature 312 321 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr1g00371 837 PRINTS EAG/ELK/ERG potassium channel family signature 479 487 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr1g00371 837 ProSiteProfiles KHA domain profile. 757 837 IPR021789 -
Accr1g00371 837 FunFam Potassium channel SKOR 76 321 - -
Accr1g00371 837 Pfam KHA, dimerisation domain of potassium ion channel 756 825 IPR021789 -
Accr1g00371 837 Gene3D Helix hairpin bin 324 382 - -
Accr1g00371 837 SMART ANK_2a 637 666 IPR002110 GO:0005515
Accr1g00371 837 SMART ANK_2a 573 602 IPR002110 GO:0005515
Accr1g00371 837 SMART ANK_2a 703 733 IPR002110 GO:0005515
Accr1g00371 837 SMART ANK_2a 606 635 IPR002110 GO:0005515
Accr1g00371 837 SMART ANK_2a 670 699 IPR002110 GO:0005515
Accr1g00371 837 SMART ANK_2a 540 569 IPR002110 GO:0005515
Accr1g00371 837 ProSiteProfiles Ankyrin repeat region circular profile. 573 605 - -
Accr1g00371 837 ProSiteProfiles Ankyrin repeat region circular profile. 606 635 - -
Accr1g00371 837 Pfam Ankyrin repeats (many copies) 658 709 IPR002110 GO:0005515
Accr1g00371 837 Pfam Cyclic nucleotide-binding domain 416 500 IPR000595 -
Accr1g00371 837 PANTHER POTASSIUM CHANNEL AKT1 53 830 IPR045319 GO:0005249|GO:0006813
Accr1g00371 837 Gene3D Jelly Rolls 383 504 IPR014710 -
Accr1g00371 837 SUPERFAMILY cAMP-binding domain-like 324 513 IPR018490 -
Accr1g00371 837 FunFam Potassium channel KAT2 384 520 - -
Accr1g00371 837 SMART cnmp_10 396 514 IPR000595 -
Accr1g00371 837 ProSiteProfiles Ankyrin repeat region circular profile. 670 702 - -
Accr1g00371 837 SUPERFAMILY Voltage-gated potassium channels 70 321 - -
Accr1g00371 837 Pfam Ankyrin repeats (3 copies) 547 635 IPR002110 GO:0005515
Accr1g00371 837 Pfam Ion transport protein 76 321 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr1g00371 837 SUPERFAMILY Ankyrin repeat 540 723 IPR036770 -
Accr1g00371 837 ProSiteProfiles Ankyrin repeat profile. 606 638 IPR002110 GO:0005515
Accr1g00371 837 ProSiteProfiles cAMP/cGMP binding motif profile. 396 516 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00371 Accr-Chr1 7266469 7279517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00371 1 702 Ion Channels AT5G37500 57.044 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00371 K21867 - qsa:O6P43_005230 1107.82