Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00363 ATGTTAGCCAATAACTCTCTCACTCCCGAGCCCTTCCCCTGCGCCGATAATGGCACTATTTCGACCAACAAGAGAAAGAGAAGACCCGCCGGAACTCCAGATCCGGACGCGGAGGTGGTGTCGCTGTCGCCGAAGACCTTACTGGAATCGGACCGGTACGTGTGCGAGATCTGCAATCAGGGGTTTCAGAGGGACCAGAACTTGCAGATGCACCGCCGGAGGCACAAGGTGCCGTGGAAGCTTCTCAAGAGGGAGACGCCAGCGGCAAGGAAGCGCGTGTTCGTCTGCCCCGAGCCCACGTGCCTGCACCACGACCCCTGCCACGCGCTCGGCGATCTCGTCGGAATCAAGAAACACTTCCGACGAAAGCACAGCAACCACAAACAATGGGTCTGTCAACGTTGCTCTAAAGGCTACGCCGTTCAGTCTGATTATAAAGCTCATCTCAAAACTTGTGGCACCAGAGGCCACTCTTGCGATTGTGGTCGCGTTTTCTCCAGGGTGGAGAGCTTTATCGAACATCAAGATGCTTGTAACATGGGGCGGCTCCGGTCGGAAACAAGGCCGCTTCAACAGCAGCAGCCACCACCGGCGTGCCTGTCGCGAACCGCTTCGAGCCCGAGTCCGTCGAGCGAAACTAATTTCAGCAACGGTCTAGTGTTGCCTAGTAATAAGCCGACAACGACGTCTGAACCGTCGGCAATATTATTGTTGAGCCCTACCAGTAATAATAATAATAATACTAGTGTTGCTCACGAAACCTCGTCGAGCAATAAGTATAATAAACTGTGTCCAAACTTGGATCTTCGTCTCTCTACCACCACCTGTACTTCCATGATTCCCTTTATTGATACTAATGCTTCACACCCAAATAAGAGAGATCATGACAGCCGTTCGAACCACTTTCGGATTTTGATCGGGTCGTCGTCGTCAGAGATGGGCCAAAAAAATGAATCCAACGGTGGCTTCAATATTATTAATAATCGCAGGAATAATTCACCCAAGGAAAGCTGTAACAGCAGCCATAAACCAGAAGGTACTAATGGAGGGATGAGGGTGGTTCTTGAAGAAGGAGAAGAAGAAGCTCGAGAGCAGTTGAGGTTAGCCATGGCGGAGAAGGCATATGCAGATGAAGCAAGGAAGCAAGCAAAACGACTGATAGAAGTGGCAGAGAAGGAGTTTGCTAATGCAAAGAGCATAAGACAAGAAGCTCAAGCTGAGCTTGAAAAAGCCTACGCCATTAAACAACATGCCATCAAACAGATCAACTCTCTCATGCTTCAAATCACATGTCATGCTTGTAAACGACAATTTTCAGCCCAAACGACAGCCACCACCACAATGATCACACCGTTGGTGGTTCCTCCTCCGCCGCAGCAGCCGGACGAGAACTCCTTGGCAGTCAGCTATATGTCGTCTGCTCTAACAACTGAACCTGGCGAGGAAGAGAACTATAATAATAATAATAGTACTGAGAAAAATCATGGCAAAAATAGTAACTCTTTATCATCTCTGTAG 1518 0.4934 MLANNSLTPEPFPCADNGTISTNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPAARKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCQRCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGRLRSETRPLQQQQPPPACLSRTASSPSPSSETNFSNGLVLPSNKPTTTSEPSAILLLSPTSNNNNNTSVAHETSSSNKYNKLCPNLDLRLSTTTCTSMIPFIDTNASHPNKRDHDSRSNHFRILIGSSSSEMGQKNESNGGFNIINNRRNNSPKESCNSSHKPEGTNGGMRVVLEEGEEEAREQLRLAMAEKAYADEARKQAKRLIEVAEKEFANAKSIRQEAQAELEKAYAIKQHAIKQINSLMLQITCHACKRQFSAQTTATTTMITPLVVPPPPQQPDENSLAVSYMSSALTTEPGEEENYNNNNSTEKNHGKNSNSLSSL 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00363 505 MobiDBLite consensus disorder prediction 186 259 - -
Accr1g00363 505 MobiDBLite consensus disorder prediction 1 20 - -
Accr1g00363 505 SMART c2h2final6 130 157 IPR013087 -
Accr1g00363 505 SMART c2h2final6 53 75 IPR013087 -
Accr1g00363 505 SMART c2h2final6 94 124 IPR013087 -
Accr1g00363 505 Coils Coil 380 421 - -
Accr1g00363 505 ProSiteProfiles Zinc finger C2H2 type domain profile. 53 75 IPR013087 -
Accr1g00363 505 MobiDBLite consensus disorder prediction 1 39 - -
Accr1g00363 505 Gene3D Classic Zinc Finger 31 95 - -
Accr1g00363 505 MobiDBLite consensus disorder prediction 308 346 - -
Accr1g00363 505 Pfam Zinc finger, C2H2 type 53 75 IPR013087 -
Accr1g00363 505 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 20 482 IPR031140 -
Accr1g00363 505 ProSitePatterns Zinc finger C2H2 type domain signature. 55 75 IPR013087 -
Accr1g00363 505 MobiDBLite consensus disorder prediction 471 505 - -
Accr1g00363 505 SUPERFAMILY beta-beta-alpha zinc fingers 50 76 IPR036236 -
Accr1g00363 505 MobiDBLite consensus disorder prediction 308 350 - -
Accr1g00363 505 FunFam protein indeterminate-domain 12-like 32 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00363 Accr-Chr1 7134858 7138010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00363 362 484 C2H2 Transcription Factor Family AT2G01940 51.613 5.35e-27 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr1g00363 zf-C2H2 0.0049 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00363 K25871 - gmx:100800187 577.4