Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00359 ATGGATAGTGATAATGGCCTTGACATGCGAAATTGGGGTTACTATGAACCCACAACCTCCTTTAAGAATCATCTTGGACTCCAGCTTATGTCGTCCATGCCTGAAAAACCCATACTTGGAGGGCGCAGTGTTCCGGTTTTTCCTGGAAACAACAATGTGGCATTTCACCATAGGACTATTGGGATGCCACAAGCAACTTACCCTATGGATTACATGAGGGAAGCTTGGATTAGTCAAAGGGAGAAGTTTATGAACATGATTCCAACAAACCCAACAAACTATGCTGTAATTCCAGAGACATCTTCGGCTCATCACATGCAGTTGGTTCAACCACCTGACTTGACGAAGGAAGAAAGACTGGTGGAAGAGGCGCCTGCTGAGAAGATTAATGGCACTAGTAAGAAAAGGCAGGGTCCCAAGTTACCCAAATCTCCCAAGGCAAAGAAGCCCAAGAGAGGACCTCGGGCACCGAAGGATGAGAATACTCTTTCAGTTCAACGAGCAAGGCCTCCGAAGAAAACTACTGAAATTGTAATAAATGGGATTGACTTGGATATCTCGAGCATTCCTATTCCGGTTTGTTCATGCACTGGTTCGCCTCAGCAGTGTTACAGATGGGGTTCTGGTGGGTGGCAATCTGCTTGCTGCACGACAAATATGTCAGTTTATCCGTTGCCTATGAGTACAAAGCGGCGTGGTGCTAGGATAGCTGGGAGAAAAATGAGTATAGGAGCATTTAAGAAAGTCTTAGAGAAACTCGCAGCTGAGGGTTATAACTTCTCTAATCCAATCGATTTGAAGACGTATTGGGCAAAACATGGCACGAACAAGTTTGTCACTATCAGGTAG 849 0.4523 MDSDNGLDMRNWGYYEPTTSFKNHLGLQLMSSMPEKPILGGRSVPVFPGNNNVAFHHRTIGMPQATYPMDYMREAWISQREKFMNMIPTNPTNYAVIPETSSAHHMQLVQPPDLTKEERLVEEAPAEKINGTSKKRQGPKLPKSPKAKKPKRGPRAPKDENTLSVQRARPPKKTTEIVINGIDLDISSIPIPVCSCTGSPQQCYRWGSGGWQSACCTTNMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLKTYWAKHGTNKFVTIR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00359 282 PANTHER - 1 282 IPR010409 -
Accr1g00359 282 Pfam GAGA binding protein-like family 1 282 IPR010409 -
Accr1g00359 282 SMART GAGA_bind_2 1 282 IPR010409 -
Accr1g00359 282 MobiDBLite consensus disorder prediction 123 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00359 Accr-Chr1 7024242 7025090 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00359 1 282 BBR or BPC Transcription factor family AT2G01930 51.178 1.53e-94 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Accr1g00359 GAGA_bind 5.3e-110 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00359 - - gmx:606296 460.299