Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00354 ATGAGTGCATCGACGACGAGGAAGAAGGTTCAGCGTAAGTGTAAGATCAGAGGGTACACTCTCAAAGTAGACGCTCTTGATGAGATCCTTTCCTTTGTAAGTCGATTTGATGCCGCTGATGAAGATGAAGCCATCGATCTCCTCCTCGATCAGCTCGAACATGAATCTCTGAAATCTACAATAATCGACAAAGAGCCGGTGCATCGGGTGGTGAGCCTGCTGTTAGAAGCCGAAGCAGCGGTTGAGGAAAGCTCTGATGCTGTTGGCATTGGTTCAGTCTTTCGCGTCGTCGATGCATTCTTAGTCCCTAAATTTCGATATGACCCTATCAAAAAGCAATTTTACGAGCATACAAGCAACTTACCTATTCATGGGGAAGCATCGGCAAAAGCGGCTCTGTACAGGGACAGATTTCAGTTGCTGTTCCAGAGGCTCTCTCGTGACCAGCATTTTGCAAAGCCGGCTTTTGACTCTGAGTCTACGTATTTTGGAAGCTGTGAGATATCTCCCATCCAATCTCTGGTTGGGCAAACAGGTAGAAGATGGATCATGGGAGTGATATCACAGCTGGAGGATGGGCATTTCTATCTAGAAGACCTAACCGCTGCGGTTGAAATCAATTTATCTACTGCTAAGATAACTACAGGATTCTTTACAGAGAACACCATAATTGTGGCGGAAGGCGAGATGCTGGTGGGGGGTGTTTTTCAGGTCATCACATGTGGATTCCCCCCATTGGAGGACAGAGATAAGTCACTAAAATTAAGTGGGGGTCATGACTTTTTTGGAGGTGGCACTTTCACTAAAGAAGAAACTATCAGACTAGCAGAGATGGAAAAGAGAGCAGTCAATGACATGTTTGTTGTACTGTCTGATATCTGGCTAGACAGCGAAGAGGCTATGGAAAAGCTGAAGACTGTACTGGATGGTTTTGAGAGTGTGGAAGTGGTCCCTTCCTTATTTGTTTTCATGGGAAACTTCTCTTCTCATCCGTGTAACCTTTCTTTTCATTCTTACTCAAGCCTCCGGTTGCAGTTTGGTAAGCTAGGGGAAATGATTGCTACCCATCCACGTCTAATAGAGAAAAGTCGATTTTTGTTCATTCCAGGTCCTGATGATCCAGGTCCTTCGACGGTTCTGCCTAGATGTGCTCTGCCAAAATATTTAATAGAGGAGCTCCAGAAATATATTCCCAATGCCATATTTTCAAGCAATCCTTGCAGGATCAAATTTTACACTCAAGAAATTGTATTTTTCCGCCAGGATTTGCTGTATAGAATGCGCCGTTCATGTTTAATGCCACCTTCTATGGAAGAAACTGATGATCCCTTTCAGCATCTTGTTGCTACCATAACCCATCAGAGTCATCTCTGTCCATTGCCTCTAACAGTACAACCCATCATCTGGAACTACGATCACTGCCTCTATCTTTATCCAACTCCACATACGATAATATTGGGAGACAGAAGTGAGCAAAAAGCATTCAAATACACAGGAATCACTTGTTTTAATACTGGTTCCTTCTCTATAGACAACACCTTTGTGGCATATCGACCATGCTCTCAGGAAGTAGAATTGTCAGCCTTGTAA 1590 0.439 MSASTTRKKVQRKCKIRGYTLKVDALDEILSFVSRFDAADEDEAIDLLLDQLEHESLKSTIIDKEPVHRVVSLLLEAEAAVEESSDAVGIGSVFRVVDAFLVPKFRYDPIKKQFYEHTSNLPIHGEASAKAALYRDRFQLLFQRLSRDQHFAKPAFDSESTYFGSCEISPIQSLVGQTGRRWIMGVISQLEDGHFYLEDLTAAVEINLSTAKITTGFFTENTIIVAEGEMLVGGVFQVITCGFPPLEDRDKSLKLSGGHDFFGGGTFTKEETIRLAEMEKRAVNDMFVVLSDIWLDSEEAMEKLKTVLDGFESVEVVPSLFVFMGNFSSHPCNLSFHSYSSLRLQFGKLGEMIATHPRLIEKSRFLFIPGPDDPGPSTVLPRCALPKYLIEELQKYIPNAIFSSNPCRIKFYTQEIVFFRQDLLYRMRRSCLMPPSMEETDDPFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLYLYPTPHTIILGDRSEQKAFKYTGITCFNTGSFSIDNTFVAYRPCSQEVELSAL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00354 529 PIRSF DNA_pol_epsilon_2 1 529 IPR016266 GO:0003677|GO:0006261|GO:0008622
Accr1g00354 529 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 4 529 IPR016266 GO:0003677|GO:0006261|GO:0008622
Accr1g00354 529 Pfam DNA polymerase alpha/epsilon subunit B 287 492 IPR007185 GO:0003677|GO:0006260
Accr1g00354 529 Gene3D - 1 72 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00354 17 486 Core DNA Replication Machinery Family AT5G22110 72.553 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00354 K02325 - qsa:O6P43_008430 917.916