Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00350 ATGGAAATGCAGGACCAAATAGAAGGAACAAAGTTCAATAACTCTGGCAATGCTAGTAATAACCTTTCCAACAATGGCACAAAATCTGAAATTGTTGTCCTGTTGAAGGATCAAACTCCTAATGTAAACAACCATACTCCTAAGGTGAGGAAACCATATACCATTTCCAAGCAAAGAGAAAAGTGGACAGAGGAAGAGCATCAGAAGTTCCTAGAAGCATTGAAATTGTATGGTCGTGGTTGGCGGCAAATTGAAGAACACATAGGTACAAAGACTGCAGTTCAGATTCGAAGCCATGCCCAGAAGTTCTTCTCTAAGGTCGCCCGGGAATCTGATGTCACCACCGAAAGTTCTATAAAACCAAGTGATATACCTCCTCCTCGGCCAAAGAGGAAACCTCTACATCCATATCCCCGTAAATCAGTTGATTCTGGCAAAAGACCATCCATAGCAAATGAAGCGGAAAGATCTCCATCCCCAAACCTGGCAGTTGCAGAGAAAGACACCCAATCCCCGACCTCTGTGCTATCTGCATTCAATTCAGAAGTATTTGGGTCAGCATCTTCAGAGCAACCTAATAGATCTCAATCACCTTATTCTTGTGCCACTGACGTTCACTCATCCAACTTATCACTATCACCTGTGGAAAAGGAAAATGATTGCATGACATTTGACTCCTCTGTGGAGGAAGAGAAAGGATCTCTTACATCACGCTCTTTATCTGCTGGTTTCAACTTACATCTGTTTTCAACGAAGTCTGAGTTGAGTTCCAAGGATACTGGATCTTCAATTGAAGATGCTACAAACATGGCTTATGTTACAAGTATTAAGTTGTTTGGAAGAACTATTCAGATGTTAGATAACCAGAAGCCACTTGATGTAGATGGGAGAATAACAATGCAATTGCAAGCAAGTAGATAA 921 0.4137 MEMQDQIEGTKFNNSGNASNNLSNNGTKSEIVVLLKDQTPNVNNHTPKVRKPYTISKQREKWTEEEHQKFLEALKLYGRGWRQIEEHIGTKTAVQIRSHAQKFFSKVARESDVTTESSIKPSDIPPPRPKRKPLHPYPRKSVDSGKRPSIANEAERSPSPNLAVAEKDTQSPTSVLSAFNSEVFGSASSEQPNRSQSPYSCATDVHSSNLSLSPVEKENDCMTFDSSVEEEKGSLTSRSLSAGFNLHLFSTKSELSSKDTGSSIEDATNMAYVTSIKLFGRTIQMLDNQKPLDVDGRITMQLQASR 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00350 306 CDD SANT 61 104 IPR001005 -
Accr1g00350 306 PANTHER SWI/SNF COMPLEX-RELATED 20 267 - -
Accr1g00350 306 ProSiteProfiles SANT domain profile. 57 108 IPR017884 -
Accr1g00350 306 SMART sant 58 106 IPR001005 -
Accr1g00350 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Accr1g00350 306 Pfam Myb-like DNA-binding domain 59 102 IPR001005 -
Accr1g00350 306 SUPERFAMILY Homeodomain-like 53 108 IPR009057 -
Accr1g00350 306 Gene3D - 61 108 - -
Accr1g00350 306 MobiDBLite consensus disorder prediction 125 142 - -
Accr1g00350 306 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Accr1g00350 306 FunFam protein REVEILLE 6 isoform X1 61 109 - -
Accr1g00350 306 MobiDBLite consensus disorder prediction 1 25 - -
Accr1g00350 306 NCBIfam myb-like DNA-binding domain, SHAQKYF class 57 106 IPR006447 GO:0003677
Accr1g00350 306 MobiDBLite consensus disorder prediction 107 172 - -
Accr1g00350 306 MobiDBLite consensus disorder prediction 7 25 - -
Accr1g00350 306 MobiDBLite consensus disorder prediction 186 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00350 Accr-Chr1 6970785 6973085 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr1g00350 Myb_DNA-binding 8.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00350 - - vum:124836796 333.954