Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00343 ATGAGGGTCTTCTGTGAGGGTATCTTCGGTGCCCTCACTCCTAAAGTTTCTGCTTCATTCTCCAACAGAGATTGCGTTCCTTTCCAAAAGCACCTGCTCAATTTGAAAACCTTCTCTTCTGTCTCTTTCCGCCATCGAAAATGGCTTGTGCTCATCTCACGACCCAGCTTCGTGAAGAAGACAAACGACAAGTACGAATACGACAGAACTAGTTGCTCCACTTCTGGCCAATGCAATGCTTCAGAAGCTTTGGAAGGTGATTTCGTGGTTGTGAATTTTTACCATTTCGTGTCTATCGATGATCCGGAAGCAGAAGTCTCTAAGCACCTGGCTTTCATGGAGGGTCTTGACATAAATGGCAGAATTTACTTGAATGAACAAGGTATAAATGCGCAGTATAGTGGACCATCAAAAGATGCTCTGGCATATGTTGAATGGTTAAGACAAGATGATAGATTTTCTGATATCCTGGTTCAGATCCATCCATCAGTGAAAGGGCATGCCTTCCCGAGATTGAAGTTGCGGTATAAGCCTTCACTTGTTCAGTTGGAAGGTGGCATATCACATCTTCCCCTTCTTGATCCTTCTATGCGAGCAACACCTCTAGTGCCATCAGAATGGAGAAATCGATTGGAAGAAATGAATAGGACTGGTCTTTCTTCAAAAGAGTGTCCTGACACCAATTACATTCTATTGGATGTGAGAAATGGTTATGAGTGGGATATTGGACATTTTCGTGGTGCTTTGCGGCCTAATGTGGACTGCTTTAGGAGCACATCATTTGGTTTGTCCCAGGAAGAGGTGGCAGCTTCAGATCCTTTAGCAAATGTAGATAAAGAAAAAACGAATATATTGATGTACTGCACTGGAGGGATTCGTTGTGATGTATATTCTACAATATTGAGAAAGAAGGGCTTTAAGAATTTGTACACCTTGAAGGGAGGTGTTTCCAACTATCTAAAGAATGAAGGTCCTCCGGAATGGGTAGGAAATCTATTTGTGTTCGACTCTCGTCTATCTCTGCCTCCGTCTTCATACAATCCTGCAGCCGCCACCACTGAAACAGACAGGACTCAAGTCTCTGCAAATGACGAGTTTGCAAAATGCTACATATGTGGTTCTCAAGTCAGTGAATTGAGGCATAGGAACTGTGCAAATCTTGACTGCAATTTGCTTTTCCTATGCTGCCGAAAATGTGTGAAGGACGTAAGGGGATGCTGTTCTTGGAGTTGTACAACTGCTCCCAGACTTAGGCCTGTTTTAGATGGACAACAGAGATACAAAAAATGGCACATCTATCGTGATACTGATGTGCACAGCAATATAACAACTTGA 1335 0.43 MRVFCEGIFGALTPKVSASFSNRDCVPFQKHLLNLKTFSSVSFRHRKWLVLISRPSFVKKTNDKYEYDRTSCSTSGQCNASEALEGDFVVVNFYHFVSIDDPEAEVSKHLAFMEGLDINGRIYLNEQGINAQYSGPSKDALAYVEWLRQDDRFSDILVQIHPSVKGHAFPRLKLRYKPSLVQLEGGISHLPLLDPSMRATPLVPSEWRNRLEEMNRTGLSSKECPDTNYILLDVRNGYEWDIGHFRGALRPNVDCFRSTSFGLSQEEVAASDPLANVDKEKTNILMYCTGGIRCDVYSTILRKKGFKNLYTLKGGVSNYLKNEGPPEWVGNLFVFDSRLSLPPSSYNPAAATTETDRTQVSANDEFAKCYICGSQVSELRHRNCANLDCNLLFLCCRKCVKDVRGCCSWSCTTAPRLRPVLDGQQRYKKWHIYRDTDVHSNITT 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00343 444 Gene3D - 194 359 IPR036873 -
Accr1g00343 444 Pfam UPF0176 acylphosphatase like domain 89 178 IPR040503 -
Accr1g00343 444 SMART rhod_4 203 325 IPR001763 -
Accr1g00343 444 Gene3D - 76 181 - -
Accr1g00343 444 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 226 341 IPR036873 -
Accr1g00343 444 Pfam Rhodanase C-terminal 330 412 IPR022111 -
Accr1g00343 444 Pfam Rhodanese-like domain 227 320 IPR001763 -
Accr1g00343 444 CDD RHOD_YceA 202 321 - -
Accr1g00343 444 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 81 426 IPR020936 -
Accr1g00343 444 ProSiteProfiles Rhodanese domain profile. 225 328 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00343 Accr-Chr1 6876972 6881650 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00343 87 437 Sulfurtransferasese or Rhodanese AT1G17850 69.444 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00343 - - gmx:100814358 600.127