Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00339 ATGGCCGATAATGATAAGAATATTGAGGTGTGGAAGATCAAGAAATTGATCAAAGCCTTGGAGGCTGCTCGAGGAAATGGGACAAGCATGATTTCTCTTATCATGCCTCCACGTGATCAGGTATCTCGTGTCACCAAGATGCTCGGTGATGAGTTTGGAACTGCGTCAAACATAAAGAGCAGAGTGAATCGGCAGTCTGTGCTTGGTGCAATCACTTCTGCTCAGCAGAGGCTTAAGCTGTATAACAGGGTTCCTCCAAATGGGCTAGTTCTGTATACTGGGACAATTGTAACAGAAGACGGAAAGGAGAAGAAGGTGACCATTGATTTTGAGCCATTTAGACCTATCAATGCATCTCTCTATCTTTGTGACAACAAGTTTCATACAGAAGCTCTTAATGAGCTTCTGGAATCTGATGACAAGTTTGGTTTTATAGTCATGGATGGAAATGGCACACTTTTTGGGACATTGAGTGGCAATACAAGAGAGGTGCTTCATAAATATAGTGTGGATCTGCCAAAGAAGCATGGAAGAGGAGGTCAGTCAGCCCTACGATTTGCCCGTCTTAGGATGGAGAAGCGTCATAACTATGTGAGGAAGACTGCAGAGCTTGCTACACAGTTTTATATTAATCCTGCTACCAGTCAGCCCAATGTTGCAGGTTTAATTCTTGCTGGTTCTGCAGACTTCAAAACTGAGCTTAGCCAGTCAGATATGTTTGATCCTCGACTTCAGGCAAAGATACTTAATGTTGTCGATGTATCTTATGGAGGGGAGAATGGCTTTAATCAGGCTATTGAACTATCATCTGAAATTCTGGCTAGTGTAAAGTTCATCCAGGAGAAACGCTTGATTGGAAAATACTTTGAGGAGATTAGTCAGGATACTGGTAAGTATGTTTTTGGGGTTGATGATACTCTTAAAGCGCTGGAGATGGGTGCAGTTGAGACACTTATTGTCTGGGAAAATCTGGATATGAATAGATTTGTCCTGAAACACAGCACTACTGGTGAAGTTGTTATAAAACACTTCAACAAGGAACAAGAGGCCAAGCAGGACAATTTTTGGGATCCTACTAGCAACGCTGAATATGAGGTTCAGGACAAGATGCCTCTTCTGGAGTGGTTTGCCAATGAGTACAGACGATTTGGCTGCAACCTTGAGTTTGTCACTAATAAATCACAAGAGGGCTCACAGTTTTGCAGGGGTTTTGGTGGTATTGGGGGGATTCTGCGCTACCAGCTTGATATGAGGACACTTGATGAATTCTCTGATGATGAAGATGTGTATGATGACTCTGAATAG 1305 0.4268 MADNDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKYSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILASVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDMNRFVLKHSTTGEVVIKHFNKEQEAKQDNFWDPTSNAEYEVQDKMPLLEWFANEYRRFGCNLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRTLDEFSDDEDVYDDSE 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00339 434 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 3 137 IPR024049 -
Accr1g00339 434 SUPERFAMILY L30e-like 276 417 IPR029064 -
Accr1g00339 434 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 2 427 IPR004403 GO:0003747|GO:0006415
Accr1g00339 434 Gene3D - 276 434 IPR029064 -
Accr1g00339 434 Gene3D eRF1 domain 1 1 132 IPR024049 -
Accr1g00339 434 Gene3D eRF1 domain 2 133 274 IPR042226 -
Accr1g00339 434 NCBIfam peptide chain release factor aRF-1 10 414 IPR004403 GO:0003747|GO:0006415
Accr1g00339 434 FunFam Eukaryotic peptide chain release factor subunit 1 1 132 - -
Accr1g00339 434 SUPERFAMILY Translational machinery components 139 273 - -
Accr1g00339 434 Pfam eRF1 domain 3 278 415 IPR005142 -
Accr1g00339 434 Pfam eRF1 domain 1 15 135 IPR005140 -
Accr1g00339 434 FunFam Peptide chain release factor subunit 1 276 434 - -
Accr1g00339 434 SMART eRF1_1_2 1 137 IPR005140 -
Accr1g00339 434 FunFam Eukaryotic peptide chain release factor subunit 1 133 274 - -
Accr1g00339 434 Pfam eRF1 domain 2 141 274 IPR005141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00339 Accr-Chr1 6791783 6793087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00339 1 434 Eukaryotic Initiation Factors Gene Family AT3G26618 88.303 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00339 K03265 - gmx:100785916 777.319