Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00320 ATGGATGAGTATCAAGAGATGGAGAGATTTGGTATGGATAATGATTTTGAAGGTGGTGAATGGATTGATGGTGAGTTCTACTACCGAAAGCGCAAAGAAAAGCGCACTCAAACCGGAGAAGATGTTCTTTATGGGGTGTTTGCAGACTCTGATGATGATGAAGATGATTATTCTAACAGAAAACGCAGAAAAGATCGTGACTTATCAAAAAAGCCTGACCTCACCAAGCCTGTGAATTTTGTTTCTACTGGAACTTTTATGCCTAATCAAGATGATACCCGTTCTAAAGAACAGGTTGAAGAGAAAAATTATGCTAGTGAGGATAGGCCAGGTTTAGGTCTTGGTATGGGAACTACTAGCACTTCTGGTTCTGGGTTAGGTTTTAATACTAGTCATCAAGAAAATGTTTCTGATGATGATAATGATGACAACAATTTTTTACCTACGGCATTTGGAAAGAAGATTAAGGAGGGAGCAATGAGAAAGGAGAGGGAAAGGGAGAGAGTGAAATTGGAAAAGAAGAGAGCTCAAGGAAAAACTCAAGCTCAAGATGAATTTGCAGATGTTGGGAAGTTTGAGAAACATACAAAGGGGATTGGAATGAAGTTGTTGGAGAAAATGGGATATAAAGGAGGTGGTCTTGGGAAGAATGAACAAGGTATTGTAGCTCCTGTTGAGGCTCATTTGAGGGCTAAGAATACAGGCATTGGATTTAATGACTCAAAGGCAACAACTCCTTTGCCCAGTGTACAAGTTGAGAAGACAGCATTGCCAGGAGTTGCTCAACCTACTGTTAGAGCAAAGGAAAGGTTATGGTCAAAGAAATCAAGGTCAAAGAAGAAGGAAGACGATGATGATTATATTACTGCTGAGGAATTGCTTGCAAGCAATCAAGAACAGGGTCTGGAAGTTGTTCAAAAGGTTTTTGATATGAGAGGGCCACAGGTTCGAGTAATTACAAATTTATCTGATTTGAATGCTGAGGAGAAGGCAAAGGAAAATGATGTTCCAATGCCAGAGCTTCAGCATAATATGGGGTTAATTGTTAGGTTGGCTGAAGCAGACATCCAAGAGATTGATAGAAATTTGAGGAGAGAGAGGGAGACTGCACTTAGCTTGAAAAAAGAAAAAGAGAAGTTAGAAACTGAGGTAGCACACCAAAAAAAGCAGTTGGAAGATTTGGAGGAAATAACAAATGTGCTGGACCGAGTCGGAGAAGAGAGCTTAATGGGGACATTGACGTTGGAGTTGCTTGCACAGTTCTTTGCTGACCTGCGGAAAAGATACGCTGATAGCTACAAGTTGTGTAACTTGTCATGTATTGCTTGCTCATATGCTTTGCCTTTGTTTATTAGAGTATTCCAAGGATGGGATCCTCTTCGAAATCCATCACATGGGTTAGAGTTGGTATCAAGGTGGAAAACATTGCTTCAAGAAGAAGATTGCCTTGATATCTGGGATGTAACATCACCTTATACTCAATTGATTTCTGAAGTTGTATTACCAGCTGTCAGGATTTCAGGTATTAATACATGGAAGGCTCGGGATCCTGAGCCAATGTTGCGGTTTTTGGAGTCATGGGAAAAATTGCTTCCTTCCTCAGTTCTCACAGCCATGTTGGACAGTATAGTCATGCCAAAATTGGCTAGTGCTGTAGATACATGGGAACCACATTGTGAGACAATTCCTATCCATACTTGGGTGCACCCATGGTTGCCTTTGTTGGGACACAAATTAGAGGGCATGTATCAGATGATACGCTTCAAATTGAGTTCTGTTCTTGGTGCTTGGCACCCAAGCGATGGCTCTGCTTATGCTATATTGTCACCTTGGAAAACTGTATTTGATTCAGTGAGCTGGGAACAGCTTATGCTTCGATTTATTGTGCCAAAGTTGCAGCTTGTCTTGCAAGAGTTTCAAGTGAACCCAGCAGATCAGAAGCTTGATCAGTTTTATTGGGTGATGAATTGGGCTTCTGCTGTTCCAGTTCATCTGATGGTTGATATAATGGAGAAGTTCTTCTTCACCAAGTGGCTTCAGGTTTTGTATCATTGGTTGTGCTCAAACCCTAACTTTGAAGAAGTTACAAAATGGTACTTGGGCTGGAAAGAACTTATTCCAAAGGAACTTTTGGCCAATGAAGGTATTCGTTATCAGCTAAACCGCGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGTTGGTCCAACCTGGCTTGAAAGAAAATATCAGCTATCTTAGGGTACTCGAGCAAAGGCAGTTTGAGGCTCAGCAAAAAGCATCAGCTCATGCTAAAACCCAAGCTCCTTCAGGCTTTGGGGGTGCTGCCCATATGGATGGTGCAGCTGGTGTACATGAGATGAGCTTAAAGGAAGTCATTGAGGCCCATGCCCAACAACATGGCTTGCTTTTCAAGCTTAAACCTGGCAGAATGCACAATGGTCATCAAATTTATGGGTTTGGTAATGTCAACATTATAATAGATTCTTTAAATCAAAAGGTATATGCCCAAACTGAGGATTTATGGTCTTTGGAATCGCTGCAAGGCTTACTGGAGCTGCATAATAAGTCCCTTGGTCGGAGACGATGA 2595 0.415 MDEYQEMERFGMDNDFEGGEWIDGEFYYRKRKEKRTQTGEDVLYGVFADSDDDEDDYSNRKRRKDRDLSKKPDLTKPVNFVSTGTFMPNQDDTRSKEQVEEKNYASEDRPGLGLGMGTTSTSGSGLGFNTSHQENVSDDDNDDNNFLPTAFGKKIKEGAMRKERERERVKLEKKRAQGKTQAQDEFADVGKFEKHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPVEAHLRAKNTGIGFNDSKATTPLPSVQVEKTALPGVAQPTVRAKERLWSKKSRSKKKEDDDDYITAEELLASNQEQGLEVVQKVFDMRGPQVRVITNLSDLNAEEKAKENDVPMPELQHNMGLIVRLAEADIQEIDRNLRRERETALSLKKEKEKLETEVAHQKKQLEDLEEITNVLDRVGEESLMGTLTLELLAQFFADLRKRYADSYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLELVSRWKTLLQEEDCLDIWDVTSPYTQLISEVVLPAVRISGINTWKARDPEPMLRFLESWEKLLPSSVLTAMLDSIVMPKLASAVDTWEPHCETIPIHTWVHPWLPLLGHKLEGMYQMIRFKLSSVLGAWHPSDGSAYAILSPWKTVFDSVSWEQLMLRFIVPKLQLVLQEFQVNPADQKLDQFYWVMNWASAVPVHLMVDIMEKFFFTKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPKELLANEGIRYQLNRGLDMMNQAVEGMELVQPGLKENISYLRVLEQRQFEAQQKASAHAKTQAPSGFGGAAHMDGAAGVHEMSLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNVNIIIDSLNQKVYAQTEDLWSLESLQGLLELHNKSLGRRR 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00320 864 Pfam G-patch domain 196 237 IPR000467 GO:0003676
Accr1g00320 864 MobiDBLite consensus disorder prediction 93 107 - -
Accr1g00320 864 MobiDBLite consensus disorder prediction 39 187 - -
Accr1g00320 864 Pfam GC-rich sequence DNA-binding factor-like protein 417 682 IPR022783 -
Accr1g00320 864 Coils Coil 159 179 - -
Accr1g00320 864 MobiDBLite consensus disorder prediction 54 73 - -
Accr1g00320 864 MobiDBLite consensus disorder prediction 155 187 - -
Accr1g00320 864 SMART G-patch_5 194 239 IPR000467 GO:0003676
Accr1g00320 864 ProSiteProfiles G-patch domain profile. 196 241 IPR000467 GO:0003676
Accr1g00320 864 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 1 851 IPR045211 GO:0000390
Accr1g00320 864 Coils Coil 349 397 - -
Accr1g00320 864 MobiDBLite consensus disorder prediction 115 134 - -
Accr1g00320 864 Pfam Tuftelin interacting protein N terminal 6 104 IPR022159 -
Accr1g00320 864 MobiDBLite consensus disorder prediction 76 92 - -
Accr1g00320 864 PIRSF TFIP11 1 859 IPR024933 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00320 Accr-Chr1 6215309 6217903 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00320 196 237 C2H2 Transcription Factor Family AT5G26610 47.619 2.90e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00320 K13103 - gmx:100781621 1367.83