Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00307 ATGGATTTTAGTTCAGAGTACTTGAAGAAGTGGAAGTATGATGTGTTTTTGAGCTTCAGAGGTGAAGATACTCGCAACAATTTCACAGGCCATCTATATGAAGCTCTGTGTCAAAAAGGAGTATATACTTTCATAGACAATGAGGAGCTCAACAGGGGCCAGGGGATTTCACCAGCACTTGAGAAAGCTATTGAAGACTCTAGAATCTCAGTTGTTGTATTGTCTAAAACCTTTGCTTTCTCCACTTCATGCTTAAATGAGGTCCTTAAGATCCTTGAGATCAAGGATTCCAAGGGGCAATTGGTTTTGCCAGTGTTTTACAACGTGGATCCTTCAGAATTACGACATCAAAAGGGAAGTTTTGAGGAAGGATTGGTCAAACACAAAGACAGGTTAGAAAACATGGAGAAGGTGAAGAGGTGGAGCGAATCCTTATGTCACGTTGCTTCTTTATCTGGTTGGCATCTTAGTAAAGGGCATGAATCTACATTCATCAAACGAATAGTCGAAGAAATACTCAATAGGCTAAACCGTACACCTTTGAACGTTGCTAAACATCCTGTGGGATTGGAGTCTCCTGTATTGGACATGGAATCATTGCTGGGCACCCAATCAGAAAAAGATGTGAGGGTTGTTGGAATCCATGGAATTGGAGGAATAGGTAAAACAACCATTGCTAAAGCTCTTTATAACCATATCTCTAACCAATTTGAGGCCCACACATTCATTGCAAACGTAAGAGAAATCTCAAAGCAAAAGTTCGGCTTAGTTCGATTACAAGAAGCACTTCTTTCGGAGACACTAAACTGCAGAGACATTAAAGTTGGAAGTGTAGATAGAGGAATCAACCTCATAAAGAGCAGACTTTGTTCTAAAAGGGTTCTCATAGTTATCGATGATGTAGATTCGATAGAGCAACTTGAATCATTGGTTGGAGAAAACAGCTGGCTTGGCTCAGGAAGCAGAGTTGTCATAACAACTAGAGATGAACATTTGTTAATTGCTCACAATATTGAAGCAGTCTACAAAGTTAAGGAATTAAGTTATGATCATGCTCTTGAATTGTTCAGCTGGTATGCCTTCAAAAAACCCTGTCCCCCCACAAATTATGAGAACCTTTCATCTCACATATTAAACTACTCCAAGGGTCTTCCATTGGCTTTAACTGTGTTAGGATCTTACTTATTTGGGAGAAGTATAACAGAGTGGAAAAGTGCAATACACAAACTAAAGAACACTCCAAGCAAACAGATTTCCAAAGTGCTTAAGATCAGTTTTGATGGGTTGGAGGAAAATGAGAAGGCCATGTTTTTAGATATTGCATGCTTTTTCAAAGGAGAGGACAAAGAGTATGTGAAGAAGATCCTAGAAGCTTGTGACTTGCACCCGGACATTGGAATCGGAGTTCTTGTGGACAAGTCCCTTGTTACTGTTGATATGAACAAGCTTTGGATGCATGACTTGATTCAAGAAATGGCTAAAGAAATTGTTCTCTCTGAATGCCCTAAAGACCCTAGCAAACGTAGCAGATTATGGTTTTATCAAGATGTTCTTCAAGTATTGATGGAACAAAAGGAAAGTAATAGCATAGAAGGCATAAGGCTAGACGTACCTGAAACTGAAAGGGTGAAGATTAGTGGCAAAGCCTTGGAGAAGATGAAAAAGCTTAGAATTCTTATGGTTGATAATGCAAGCTTTTCAGGTGGTGTTCCATATCTGTCTGAAGAGCTAAAGTTAATTGATTGGCCAAAATATCCATCTTCAACTCTGCCACCAAACTTCTATCCAAAGAGGCTTGTTTCTGTAAAGATGAATCATAGCCGCATTAAGCATTTATGGAAGGGAGTCAAGATATTTCGAGATTTGAAGTTTTTATCTTTTAGCTGTTGCGAATATCTCTCAGAAATTCCAAACCTCTCATTGACCCCACACATTGAGAGTTTGAATCTAGACCATTGCAAAAGCCTAATGGAAGTTCATGAGTCTGTGGGATCTCTTGAAAAGCTTGTTACCTTAAACCTTGCTTTTTGCTCCAATCTCAAGACTCTTCCAAGTGGTTTCAGGTTAAAGTCTCTACGCTCTCTTCTCCTTACAGGCTGCTCAAACCTCAGAAACTTCCCTGAGATTGTTGAGAAAATGGCAAGTGTCGAAGAAGTCCTTCTCGAAGGGACTTCCATAAAAGCATTACCTCAATCAATAGAACATCTGATTGGTCTAAAAGCATTGTTGTTGGATTCTTGTCAAATGCTTGAGCATGTTCCTAGTAGCATTGAGAAATTGCAGTACCTTACTTGTCTATCTCTCACAAACTGCCCGAAAATAAGAGAGCTTCCATTGCTGTCACGGAATACAAGTTTAATATGGACAGATAATTGCAAATCGTTGCAAAAGTTTCCACATTTATACAGCCCATCAAGTTCATTTGTTGGTGTACAGGACTTCAGAAGAGTTTGTTATATGAGTTTTGTCAATTGCCATAAACTGATTCATAAGCAATTACAAGATCACATCACAAATCGTTTATTTCAAGAGGTTGCCCTCTTTTCTCTTCATCTTCCTTTATAG 2565 0.3903 MDFSSEYLKKWKYDVFLSFRGEDTRNNFTGHLYEALCQKGVYTFIDNEELNRGQGISPALEKAIEDSRISVVVLSKTFAFSTSCLNEVLKILEIKDSKGQLVLPVFYNVDPSELRHQKGSFEEGLVKHKDRLENMEKVKRWSESLCHVASLSGWHLSKGHESTFIKRIVEEILNRLNRTPLNVAKHPVGLESPVLDMESLLGTQSEKDVRVVGIHGIGGIGKTTIAKALYNHISNQFEAHTFIANVREISKQKFGLVRLQEALLSETLNCRDIKVGSVDRGINLIKSRLCSKRVLIVIDDVDSIEQLESLVGENSWLGSGSRVVITTRDEHLLIAHNIEAVYKVKELSYDHALELFSWYAFKKPCPPTNYENLSSHILNYSKGLPLALTVLGSYLFGRSITEWKSAIHKLKNTPSKQISKVLKISFDGLEENEKAMFLDIACFFKGEDKEYVKKILEACDLHPDIGIGVLVDKSLVTVDMNKLWMHDLIQEMAKEIVLSECPKDPSKRSRLWFYQDVLQVLMEQKESNSIEGIRLDVPETERVKISGKALEKMKKLRILMVDNASFSGGVPYLSEELKLIDWPKYPSSTLPPNFYPKRLVSVKMNHSRIKHLWKGVKIFRDLKFLSFSCCEYLSEIPNLSLTPHIESLNLDHCKSLMEVHESVGSLEKLVTLNLAFCSNLKTLPSGFRLKSLRSLLLTGCSNLRNFPEIVEKMASVEEVLLEGTSIKALPQSIEHLIGLKALLLDSCQMLEHVPSSIEKLQYLTCLSLTNCPKIRELPLLSRNTSLIWTDNCKSLQKFPHLYSPSSSFVGVQDFRRVCYMSFVNCHKLIHKQLQDHITNRLFQEVALFSLHLPL 854
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00307 854 SUPERFAMILY "Winged helix" DNA-binding domain 417 521 IPR036390 -
Accr1g00307 854 Gene3D Ribonuclease Inhibitor 527 714 IPR032675 -
Accr1g00307 854 Pfam TIR domain 12 182 IPR000157 GO:0007165
Accr1g00307 854 PRINTS Disease resistance protein signature 211 226 - -
Accr1g00307 854 PRINTS Disease resistance protein signature 288 302 - -
Accr1g00307 854 PRINTS Disease resistance protein signature 381 395 - -
Accr1g00307 854 PRINTS Disease resistance protein signature 664 680 - -
Accr1g00307 854 Gene3D - 7 175 IPR035897 -
Accr1g00307 854 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 440 IPR027417 -
Accr1g00307 854 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 154 IPR035897 -
Accr1g00307 854 Gene3D - 176 341 IPR027417 -
Accr1g00307 854 Pfam NB-ARC domain 204 421 IPR002182 GO:0043531
Accr1g00307 854 Gene3D Ribonuclease Inhibitor 715 834 IPR032675 -
Accr1g00307 854 ProSiteProfiles TIR domain profile. 11 176 IPR000157 GO:0007165
Accr1g00307 854 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 773 IPR044974 GO:0006952
Accr1g00307 854 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 178 - -
Accr1g00307 854 SUPERFAMILY L domain-like 500 804 - -
Accr1g00307 854 Gene3D - 346 430 IPR042197 -
Accr1g00307 854 SMART till_3 12 151 IPR000157 GO:0007165
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Accr1g00307 Accr-Chr1 6110629 6117520 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00307 13 782 WRKY Transcription Factor Family AT4G12020 32.405 1.15e-106 360
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00307 - - ccaj:109793662 1118.22