Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00304 ATGAATCTGAGCAACAACGTCAAGGGATCCATGTCAACGACCAGTTCTAGTTCCGCTCTGAAATCCGGCGGTGACTGCGCCAGTGCCGTCGACCAGTTCCCAGCGGGGTTGCTTGTACTGGTGGTTGACAATGATCCTACTTGCCTTATGGTCCTTGAGAAGATGCTTCGTACTTGTCTCTACGAAGCAAAATGCGAGAGAGCTGAAGTTGCATTGTCTCTTCTGAGAGAGAACAAAAATGGGTTCGACATAGTTATAAGCGATGTGCATATGCCAGACATGGATGGCTTACTTGTTGATGAGAATGGGAGAAAGAGCAGTTTGCGGCTGTGGAGAATCAATGAACTGATGCATAGGGACTGGTGTGTGCGTCTGGATTCTCAATTGTATCAAGGAAAAAAAAATCACAGGTAA 414 0.4662 MNLSNNVKGSMSTTSSSSALKSGGDCASAVDQFPAGLLVLVVDNDPTCLMVLEKMLRTCLYEAKCERAEVALSLLRENKNGFDIVISDVHMPDMDGLLVDENGRKSSLRLWRINELMHRDWCVRLDSQLYQGKKNHR 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00304 137 Pfam Response regulator receiver domain 39 98 IPR001789 GO:0000160
Accr1g00304 137 Gene3D - 21 109 - -
Accr1g00304 137 ProSiteProfiles Response regulatory domain profile. 38 137 IPR001789 GO:0000160
Accr1g00304 137 PANTHER TWO-COMPONENT RESPONSE REGULATOR 39 97 IPR045279 GO:0009736
Accr1g00304 137 SUPERFAMILY CheY-like 34 99 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00304 Accr-Chr1 5921972 5922777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00304 18 102 Response Regulator Gene Family AT4G16110 68.605 2.35e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr1g00304 Response_reg 3.1e-09 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00304 - K14491 gmx:100814930 133.265