Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00303 ATGGCACTTCAAGGACTACGATCCTCCTCCTTCTCCGACGAATGGACTTACGATGTATTCCTTAGTTTTAGAGGCGAAGATACCCGCAATAGTTTTATCAGCCATCTCTACAATTCTCTAAATGAAAAGGGTATTCGCACCTTCATTGATAAGGTGGATCTCCAAAGAGGGCAAGAAATTACTCCAGCTCTTATCAGCGCCATTCAACAATCTAGGATTGCGATCGTTGTTTTCTCTCAAAATTATGCTTCCTCCACTTTTTGCCTTGATGAACTTGCCAGCATACTTCACTACGTCAGAGGAGAAGGTCGGTTGGTCTGGCCCGTGTTCCACGGTGTTGATCCATCGGAAGTGCGACACCATCGTGGGAGTTACGGCCAGGCGTTGGCAAAACACGAGGATCGATTTCGAGCCAACAAGGAGAAAGTGAGAAAGTGGGAGGAGGCTTTAAGTGTGGCGGCTAACCTATCTGGCTGGCATTTCCAACATCGATCTCAACCTGAATATGAATTTATAAGTGGGATCATTGAAGAGGTGTCCAAAAAGATCAATCGCGCTCTTTTGCATGTAGCTAATCACCCTGTTGGACTAGAATCTTCTGTTCACGAAATTATCTCACTCTTGAAACTTGGATCTGGTGAAAGATTTATCATGTTAGGGATTTACGGAGTCGGTGGAGTTGGTAAAACAACCGTTGCGCGTGCTGTTTATAACCTCATCGGAGATCAATTTGAAGGTGCATGTTTTCTTGCTGATATCAGAGAGAAGGCTAACAAGCATGGACTCGTACAACTTCAAGAGACGCTACTTTCTGAAGTTGTTGCAGAAAACAATCTCAGACTTGGAGATGTTCATAGAGGGATTCCAATCATAAAAAGAAGGCTCTGCCGGAAGACGGTTCTTTTGATTATTGATGATGTTGATAATCTTAAACAGTTACAGGCAATTGCAGGAGGACCTGGTTGGTTTGGATGTGGCAGTAGGATCATTGTCACAACAAGAGACAAACATTTGCTTACTACTCATGGGGTGGAAAAATTTTTTGAGGTGAAAGAGCTAAATGTTAAAAAATCCCTTGAATTGTTGAGCTGGAATGCCTTTAAGAATAACAGAGTTGATCCAGGTTACAGGGATGTTTTAAACCGTGCAGTCTTTTATGCTGGTGGTCTTCCCTTGGCTTTGGAAGTAATAGGCTCTAACCTATTTGGAAAAACAATAGAACAATGGAATTCTATGCTAGACAAGTACAAAAGTATTCCTAACGGAGAGATCCATGAAATCCTGAAAGTAAGCTATGATAGTTTGGAAGAGAACGAGAAGGAAATTTTCCTTGACATTGCTTGTTTCTTTAATAAATTAGAAATGAGTTACACCAAGGAAATGCTGTATGCGCATGGCTTACATGGAGAGATTGGTATTCAACTTTTGAAGGACAAATCTCTCATCAAGATTGATGGTTCAAACCGTGTGAGAATGCATGACTTGATCCAAGACATGGGTAGAGAAATTGTTAGGCAGGAATCGACACTTGAGCCTGGCAAGCGTAGCCGGCTGTGGTTTGATGAGGACATTGTTCGTGTGTTGGAAGAAAATGAGGGAACTGAGGAAATTGAAATCATTATGCTGCACTCATGCAAGTATAAAGAAGTGCATTGGAGTGGAGTGGCTTTCGAGAAGATGAAAAACCTGAGAATCCTTATTATTGAGGATGTTTGCTTTTCTAGAGGCCCCAAGTATCTCCCAAATGCTTTGAGAGTATTGGACTGGAGTGGATATCCATCATTGTCTTTACCACCTGATTTTAACCCAAAGAATCTTCTCATACTTAGCCTACCTGAAAGCTGCCTTCAAATTTTGAAATCACCAAAGGTGTTTTGTTCTCTGTGTCTCCTGGATTTTGAAGGTTGTAAATTCTTAACACGAGTACCTAACCTATCTGAACTGCCTAACTTGGGGGGGCTGTGTCTTGATTACTGTACAAATTTGATTAGTTTTCATGAATCAATTGGGTTTCTTCGTAAGCTCAGATTGTTGAGTGCCCAAGGTTGCAGTCAGCTTGAAATGTTGGCACCTTGCATCAATTTGAGATCTCTTGAGACTCTGGATCTCAGGGATTGTTCAAGTTTTTTGGTTTTCCCAGAAGTATTGGGACCAATGGAGAATACAAGAGACATTTATTTGGATCAGACCGCCATAAAAGAACTGCCATTGTCAATTGGAAACCTAATTGGGTTGAAAAAGCTATACTTGAGGTGTTGTAATGGGCTTGAACAGTTACCAGGCAGCATATTTATAATCCCCAAGCTTGAGCTGGTGCTGTCTTATGGGAGCAGAGGGTTTCAATTGTTTAAAGGGTTTGAAATTCAAGAAAAACAGAGGTCAGAGGCGTTTGTAGCCACGATTTTTCTCCATTGTCTACCAGATATTTGGAATGAAAGTCTAACTCGTGCTCGTTTCAATCACGACCTTGATGGCTACTGTATAAGCAAAAGTGAAACAAATTTCATTCAAATATTTACTCTTCCTCATACTTTGATTAGTTTTGTTCTGCTTCCCAGAGCTACCACTGGAGTTCCTCATGTTTCAGGCTGCTCTAGAATCCTGCCATTTGTGGAGGAACCAGGGAAAATATTAAGAGCCTTCTATGCGAGAAGCGGATCATCAGTGTCTTTTTGGTATTGTGAGAAATTCCCAAAGATAGCCATATGTGTGATTGGGGGATCAGGTGCAGAAATAGACGATTCAATCTTGGATATCAGGCTGAGAGTGTTTGTTAATGATTCTGAGCAACTTATTTGTTTGTGTAATTACATAGTCTATAAACAAAAAATGGCAAAACATATAATCTGGTGCGGCCTGCGATGCAAACAGGAGAGGGTGATTTCTACACATAAATGGAATCATGTTCAGGTTTCCTGGGAGTTGCAATACCACCGGCCATATGATCCTTATAGGGTAATTTCAGACAACAATGGAATCCCAACAGTTAATATAGATTTGTCTGGAATTCATGTCTTTGAGGAAGAAAACAGCTGCATTGAAAATATCCGGTTCACAAATCCTGATAACTCTCTGTCTCAGGCTGAAACGATGAGAAATGACTATAGAATATTCTATTCTCCTTCAGATCTTTCACATGACCGCCTTGTCCAGTTACTTGTACAATTGAGAGATTACATATCAGATATCCTAAGGATGAGCTATATTCACTCTGGTCATGCAGCTGGTGATCCTAAAATGGAGTTCCCTTTACTTAATTTTGAAGGACTTAGGTGCATGTTTAAGGAGGCGTTGAATGCCAAGGCGCCAGGTTTAGTGCCCTTGCTTCGAGGCTCAAGAGTTGAGATGGAAGGTGTGATGACTAAGGAGCAGAGGAAGGAGGCTTTTAACCCGTTTACTTGTGTGGATGTCTTGAAAAGTTTGACTAGATGGAGCTTGTTTAATTTCTTCATGATGAAGCTAACTATGGTGCTCTTGTTCAGCGCGCTCCTTGAATGGATTCTCCACACCAATAAGCATATCAACTAA 3528 0.4113 MALQGLRSSSFSDEWTYDVFLSFRGEDTRNSFISHLYNSLNEKGIRTFIDKVDLQRGQEITPALISAIQQSRIAIVVFSQNYASSTFCLDELASILHYVRGEGRLVWPVFHGVDPSEVRHHRGSYGQALAKHEDRFRANKEKVRKWEEALSVAANLSGWHFQHRSQPEYEFISGIIEEVSKKINRALLHVANHPVGLESSVHEIISLLKLGSGERFIMLGIYGVGGVGKTTVARAVYNLIGDQFEGACFLADIREKANKHGLVQLQETLLSEVVAENNLRLGDVHRGIPIIKRRLCRKTVLLIIDDVDNLKQLQAIAGGPGWFGCGSRIIVTTRDKHLLTTHGVEKFFEVKELNVKKSLELLSWNAFKNNRVDPGYRDVLNRAVFYAGGLPLALEVIGSNLFGKTIEQWNSMLDKYKSIPNGEIHEILKVSYDSLEENEKEIFLDIACFFNKLEMSYTKEMLYAHGLHGEIGIQLLKDKSLIKIDGSNRVRMHDLIQDMGREIVRQESTLEPGKRSRLWFDEDIVRVLEENEGTEEIEIIMLHSCKYKEVHWSGVAFEKMKNLRILIIEDVCFSRGPKYLPNALRVLDWSGYPSLSLPPDFNPKNLLILSLPESCLQILKSPKVFCSLCLLDFEGCKFLTRVPNLSELPNLGGLCLDYCTNLISFHESIGFLRKLRLLSAQGCSQLEMLAPCINLRSLETLDLRDCSSFLVFPEVLGPMENTRDIYLDQTAIKELPLSIGNLIGLKKLYLRCCNGLEQLPGSIFIIPKLELVLSYGSRGFQLFKGFEIQEKQRSEAFVATIFLHCLPDIWNESLTRARFNHDLDGYCISKSETNFIQIFTLPHTLISFVLLPRATTGVPHVSGCSRILPFVEEPGKILRAFYARSGSSVSFWYCEKFPKIAICVIGGSGAEIDDSILDIRLRVFVNDSEQLICLCNYIVYKQKMAKHIIWCGLRCKQERVISTHKWNHVQVSWELQYHRPYDPYRVISDNNGIPTVNIDLSGIHVFEEENSCIENIRFTNPDNSLSQAETMRNDYRIFYSPSDLSHDRLVQLLVQLRDYISDILRMSYIHSGHAAGDPKMEFPLLNFEGLRCMFKEALNAKAPGLVPLLRGSRVEMEGVMTKEQRKEAFNPFTCVDVLKSLTRWSLFNFFMMKLTMVLLFSALLEWILHTNKHIN 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00303 1175 Gene3D Ribonuclease Inhibitor 521 786 IPR032675 -
Accr1g00303 1175 Coils Coil 129 149 - -
Accr1g00303 1175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 446 IPR027417 -
Accr1g00303 1175 Pfam NB-ARC domain 198 435 IPR002182 GO:0043531
Accr1g00303 1175 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 159 IPR035897 -
Accr1g00303 1175 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Accr1g00303 1175 SUPERFAMILY "Winged helix" DNA-binding domain 423 529 IPR036390 -
Accr1g00303 1175 SMART till_3 16 156 IPR000157 GO:0007165
Accr1g00303 1175 Gene3D - 352 436 IPR042197 -
Accr1g00303 1175 Pfam TIR domain 17 185 IPR000157 GO:0007165
Accr1g00303 1175 SUPERFAMILY L domain-like 541 772 - -
Accr1g00303 1175 Gene3D - 182 346 IPR027417 -
Accr1g00303 1175 SMART AAA_5 215 353 IPR003593 GO:0016887
Accr1g00303 1175 Gene3D - 10 181 IPR035897 -
Accr1g00303 1175 PRINTS Disease resistance protein signature 693 709 - -
Accr1g00303 1175 PRINTS Disease resistance protein signature 387 401 - -
Accr1g00303 1175 PRINTS Disease resistance protein signature 294 308 - -
Accr1g00303 1175 PRINTS Disease resistance protein signature 218 233 - -
Accr1g00303 1175 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 773 IPR044974 GO:0006952
Accr1g00303 1175 ProSiteProfiles TIR domain profile. 15 187 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00303 Accr-Chr1 5892046 5908894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00303 11 783 WRKY Transcription Factor Family AT4G12020 33.291 7.96e-100 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00303 - - ahf:112736348 1074.69