Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00287 ATGGAGATAGAGGCGAGCAGGGCGGTTGGGAATAATAATCATGGGACGGCGGCGATTCCGGGGCTGAGTCCACTCAGTGAGACGTTGTGGAGGGAGACAAAGACTAATGTTGATTTTGTCGGAGATGTGGCGGCTAGGCTGACATGGAAGGATCTCACCGTCATGGTTACTCTTGGCAACGGAGATACCCAGAATGTTCTAGAGGGTCTCACCGGCTATGCCGAGCCCGGCACCTTCACCGCCCTCATGGGCCCCTCCGGCTCCGGCAAGTCCACCCTCCTCGACGCCCTCTCTAGCCGTCTCGCCGCTAATGCCTTCCTCTCTGGATCTATCCTCCTCAATGGTCGCAAAGCCAAGCTCTCTTTTGGAACTGCCGCATATGTGACGCAAGACGACAACCTTATCGGAACTTTGACAGTACGAGAAACGATATCATACTCGGCGCGTCTGAGGATGCCGGATAAGATGCCAAGCTCTGACAAGCGAGCTTTGGTGGAGAGTACAATAATAGCCATGGGGCTTCAGGATTGTGCCGACACGGTGATCGGAAACTGGCATCTCCGGGGAATCAGTGGCGGAGAGAAGAGAAGAGTTAGTATCGCTTTGGAGATCTTAATGAGGCCCAGGTTGTTGTTTCTTGATGAACCTACCAGTGGTCTCGACAGTGCTTCAGCTTTCTTTGTGACACAAACACTACGAGCCCTTGCAAGGGATGGTCGAACAGTGATAGCTTCAATTCACCAACCTAGCAGTGAAGTCTTTGAACTCTTTGACCAATTGTACCTTCTTTCTGGCGGCAAAACTGTTTACTTTGGCCAAGCCTCTGAAGCTTACGAGTTCTTTGCACAAGCTGGCTTTCCATGCCCTGCTTTGAGAAACCCTTCTGATCATTTCCTTAGATGCATCAACTCTGACTTTGATAAAGTCAAGGCCACTCTCAAAGGCTCCATGAAACTCAGGTTTGAAGGAAGTGATGATCCTCTGGATAAGATAACCACAGCTGAAGCCATCCGAACTCTCATAGAATATTATCGGACTTCTCAGTACTCTTACGCTGCAAAACAGAAAGTGGATGAGATTTCGAAAGTGAAAGGGACAGTGCTGGATTCTGGAGGAAGCCAGGCTAGTTTCTTCATGCAGGCTTTTCAATTAACAAAGCGATCCTTCGTCAACATGTCGAGGGACTTCGGTTACTACTGGCTTCGCCTCGTCATCTACATAGTCGTCACCATCTGCATTGGAACCATCTATTTAAACGTCGGAACCGGCTACAACTCCATTCTGGCGAGAGGTTCGTGTGCATCGTTTGTGTTTGGGTTTGTGACGTTCATGTCGATCGGAGGGTTCCCGTCGTTTGTGGAGGATATGAAGGTGTTTCAGAGGGAGAGGCTGAATGGGCACTATGGGGTGGTGTCGTTTGTGATAAGCAACACATTATCAGCGATGCCGTTTCTGATACTGATAACGTTTCTGTCAGGAACCATATGTTACTTCATGGTTAGGCTCCACCCAGGCTTCTGGCACTATCTCTTTTTTGTGTTGTGCCTTTATGCAAGTGTCACTGTTGTTGAGAGCTTGATGATGGCCATTGCTAGTATCGTCCCTAACTTCCTCATGGGTATCATCATTGGTGCTGGCATTCAGGGAATATTCATGTTGGTGTCAGGCTACTTCAGGCTCCCACACGACATACCAAAGCCATTCTGGCGCTACCCAATGTCTTATATCAGCTTCCACTTCTGGGCATTACAGGGCCAGTACCAAAATGATCTGAAGGGGTTGATCTTCGACAACCGGACGCCGGAACTTCCAAAGATTCCAGGGGAGTACATACTGGTGAACGTGTTTCAGATCGACGTAAGTAGATCGAAGTGGATCGATTTGATTGTAATCTTCTGCATGATCATCATATATAGGATCATATTCTTCATAATGATCAAGATCAACGAGGATGTGACCCCTTGGATTAGGGGTTACTTAGCCAGGAGGAGAATGCAGCAGAAGAGTGCGACACACCAGAACACTACCATTGCTCCTGATGTTCTAACTCAGTCTCCTTCTCTAAGAACCTACGTTACAAGCCAATCCAGTGCTGGTGCTGCTAGGAAAAGGTAA 2115 0.4851 MEIEASRAVGNNNHGTAAIPGLSPLSETLWRETKTNVDFVGDVAARLTWKDLTVMVTLGNGDTQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGSILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRMPDKMPSSDKRALVESTIIAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEGSDDPLDKITTAEAIRTLIEYYRTSQYSYAAKQKVDEISKVKGTVLDSGGSQASFFMQAFQLTKRSFVNMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVVSFVISNTLSAMPFLILITFLSGTICYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPFWRYPMSYISFHFWALQGQYQNDLKGLIFDNRTPELPKIPGEYILVNVFQIDVSRSKWIDLIVIFCMIIIYRIIFFIMIKINEDVTPWIRGYLARRRMQQKSATHQNTTIAPDVLTQSPSLRTYVTSQSSAGAARKR 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00287 704 FunFam ABC transporter G family member 11 41 284 - -
Accr1g00287 704 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 36 669 - -
Accr1g00287 704 Pfam ABC-2 type transporter 380 586 IPR013525 GO:0016020|GO:0140359
Accr1g00287 704 ProSitePatterns ABC transporters family signature. 190 204 IPR017871 GO:0005524|GO:0016887
Accr1g00287 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 284 IPR027417 -
Accr1g00287 704 Pfam ABC transporter 69 218 IPR003439 GO:0005524
Accr1g00287 704 SMART AAA_5 76 247 IPR003593 GO:0016887
Accr1g00287 704 Gene3D - 41 285 IPR027417 -
Accr1g00287 704 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 47 290 IPR003439 GO:0005524
Accr1g00287 704 CDD ABCG_EPDR 44 272 - -
Accr1g00287 704 Pfam ABC-2 type transporter 247 303 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00287 Accr-Chr1 5656408 5660573 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00287 77 278 Calmodulin-binding Proteins AT2G36910 30.516 1.09e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00287 K05681 - gmx:100803731 1241.1