Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00241 ATGAAGAAAGTCCTATATGTGGATACTGAGAAGTCTGAGAAAACTAGCTTCATGGTTGTATTTGACAAGTTGGTGAAGGAACTTCAGGAACCTGTAGACTTTGAACTTCCAGATTGGTGTGATAAGTGGAAGCCAATGCCTTTCACCTCTATAAAACGCAATATATATCGCACAAAGAAGGTCAGAAAACGACTTGATGATGATGATGGCATTTTCTGTTCCTGTACCCCCTCAGCTGGATCTTCCAGTGTATGTGGTAAAGACTGCCTCTGTGGGATGCTGTTTTCTACTTGCTCGTCAGGCTGTAAATGTGGGAGCTCCTGTCTGAACAAACCATTCCAGAGTCGACCTATGAAGAAGATGAAACTGGTTAAGACAGAGAAATGTGGTTCGGGAATTTTGGCAGATGAGGATATTGAACAGGGGGACTTTGTGATAGAATATGTAGGAGAAGTCATTGATGACAAAGAATGTGAACAGAGGCTTTGGAATATGAAACATCAAGGGGAGACAAACTTCTACTTATGTGAAATAAACCGAGATATGGTGATTGATGCAACATTCAAGGGAAACAAATCAAGATATATCAACCATAGTTGCTGCCCCAACACTGAGATGCAGAAATGGATAATTGACGGTGAAACAAGAATTGGCATATTTGCAACTCGTGACATTAAAAAGGGGGAACATCTGACTTACGATTACCAGTTTGTTCAGTTTGGTGCAGATCAGGATTGTCATTGTGGTGCTGTTACATGCAGGCGTAAGCTGGGGGTTCGACCACCCAAGCCCAAAATGGCTTCTGATGCTGCATTTGCATATCAGGTTTATCAAACTGGACGTATGCATACAGGAGGTTCTTCGCACAAATGCATTGGTCAAGTTGTTAGGATAAATGAGAGGTTTGGGATCATTAGGCAGTTTGATAAATATTTCAAAAAGCATTTGATCATGTTTGAGGATGGCACTCTTAATTCTGTTGACATGTCAGAAGAAGACTGGGAACTTGTGAGACAGTGA 1020 0.4137 MKKVLYVDTEKSEKTSFMVVFDKLVKELQEPVDFELPDWCDKWKPMPFTSIKRNIYRTKKVRKRLDDDDGIFCSCTPSAGSSSVCGKDCLCGMLFSTCSSGCKCGSSCLNKPFQSRPMKKMKLVKTEKCGSGILADEDIEQGDFVIEYVGEVIDDKECEQRLWNMKHQGETNFYLCEINRDMVIDATFKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGEHLTYDYQFVQFGADQDCHCGAVTCRRKLGVRPPKPKMASDAAFAYQVYQTGRMHTGGSSHKCIGQVVRINERFGIIRQFDKYFKKHLIMFEDGTLNSVDMSEEDWELVRQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00241 339 ProSiteProfiles SET domain profile. 119 236 IPR001214 GO:0005515
Accr1g00241 339 PANTHER SET DOMAIN PROTEINS 29 265 - -
Accr1g00241 339 SMART PostSET_3 242 258 IPR003616 -
Accr1g00241 339 SMART set_7 119 242 IPR001214 GO:0005515
Accr1g00241 339 SUPERFAMILY SET domain 17 248 IPR046341 -
Accr1g00241 339 Gene3D SET domain 25 272 IPR046341 -
Accr1g00241 339 ProSiteProfiles AWS domain profile. 68 117 IPR006560 GO:0005634|GO:0042054
Accr1g00241 339 ProSiteProfiles Post-SET domain profile. 242 258 IPR003616 -
Accr1g00241 339 FunFam Histone-lysine N-methyltransferase 34 274 - -
Accr1g00241 339 SMART shorttest3 68 118 IPR006560 GO:0005634|GO:0042054
Accr1g00241 339 CDD SET_ASHR3-like 120 258 - -
Accr1g00241 339 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 41 299 IPR025787 -
Accr1g00241 339 Pfam SET domain 130 235 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00241 Accr-Chr1 4744532 4751169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00241 98 257 C2H2 Transcription Factor Family AT2G23740 35.556 2.19e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr1g00241 SET 5.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00241 - - gmx:100808183 535.413