Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00210 ATGAGATTCTGGGGCATCGAAGTGAAACCTGGAAAACCATATCCTTATCACGCGGATAATGTGCAAGGGACGCTTCATGTAACTCAGGCAACCTTAGGCCTTGGCTCATCAACTGAGAAAAGCATTCTCCAATGTTCTACTGGACGTAAAAATCCAGTCTTTTTGTGCTCCTTGCTTCCAAATAAGACTGAGGCGTGCCCTTTGAATCTTGAGTTTGATGAAGATGATTTAGTGTCCTTCTCAGTAATTGGCCCACGAAGTATCCATCTCTCTGGTTTTTTTGAGGCTGCTGATGGGGATGAACTTAGGGATGACTATGAGTATGATTCTTTTGGAGAGGATGTTACTGATACAGAGGATTCTTCTGAATACAACACTGAAGATGAATATGCTGATGGCTTCATTGATGATAGTGATATTGACAGTTATCCATCACCTGTCCCAAATAGTGGAGTTGTAATTGAGGAAATAGTTGATGATGATAAGCCTGAAAATGGAGATAATGCTTCCAAGAAGTTGAAGAAAAAAGTTCAAATGCCTAACTCTAAGGACGACAAGAATTCTCAGCAGCCAATTGTTGTCAGAGGTGATAAGGGCGTCCCTGTTTTGGAAAGTGAAGATGAAGACGGTTTTCCAATTTCTCCTTCTCTGAAGGCAGAAGTTAAAGAGGAAAAGACACGAGAGAGAACTGAGAAAGCCAATAAAAAGAAAGTGAAAGACGATGATCATTCTGCAACATTGAAACGAAAAGTTGAAGGTGCTGACAAAGATGAGTGTCTAGAAGGGAAAAAGACAAAGAAAAAGAAGTTGAAAGAACAAGGTAAAGGAGACAGTGCCAAAGTATCTGGTGATAGCAACGAGACTCATGATACTAGTGCAGATGGTAAGCATCCTGAGGAGGTGAAAGAACAAGGTGAAGGAACTGTATCCAATGAAAAAATCCTTGATGAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGCTAAGGATGATGGGGTAACTAATGCGAATCAAACTTCTGAGAGAGGAGAGGAGGAAATAGAAGCCAAGGCATCTCAATTAAGAACCTTCCCAAATGGGTTAGTCGTTGAGGAACTATCCATGGGTCAACCAGATGGCAAAAAAGCTACTGCTGGAAAACAGGTCAGTGTTACTTACACTGGCAAGCTACAGAAAAATGGGCAAATATTTGACTCGAATGTTGGAAGAGCACCCTTTAAATTTCGCCTTGGTGTAGGGCAAGTCATAAAGGGTTGGGACGTGGGGGTCACTGGGATGAGAATTGGGGACAAAAGAAGAATCACAATTCCACCATCTATGGGTTACGGAGATAAGCGTGTCGGGAGTAGTATACCTCCAAATTCTTGGCTTGTGTTTGAAGTTGAGTTGCGCAATGTTCGCTGA 1410 0.417 MRFWGIEVKPGKPYPYHADNVQGTLHVTQATLGLGSSTEKSILQCSTGRKNPVFLCSLLPNKTEACPLNLEFDEDDLVSFSVIGPRSIHLSGFFEAADGDELRDDYEYDSFGEDVTDTEDSSEYNTEDEYADGFIDDSDIDSYPSPVPNSGVVIEEIVDDDKPENGDNASKKLKKKVQMPNSKDDKNSQQPIVVRGDKGVPVLESEDEDGFPISPSLKAEVKEEKTRERTEKANKKKVKDDDHSATLKRKVEGADKDECLEGKKTKKKKLKEQGKGDSAKVSGDSNETHDTSADGKHPEEVKEQGEGTVSNEKILDEKKKKKKKKKKKKAKDDGVTNANQTSERGEEEIEAKASQLRTFPNGLVVEELSMGQPDGKKATAGKQVSVTYTGKLQKNGQIFDSNVGRAPFKFRLGVGQVIKGWDVGVTGMRIGDKRRITIPPSMGYGDKRVGSSIPPNSWLVFEVELRNVR 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00210 469 Gene3D Nucleoplasmin core domain 1 100 - -
Accr1g00210 469 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 376 465 IPR001179 GO:0003755
Accr1g00210 469 Coils Coil 311 331 - -
Accr1g00210 469 Gene3D - 310 469 IPR046357 GO:0003755
Accr1g00210 469 FunFam Peptidyl-prolyl cis-trans isomerase 357 469 - -
Accr1g00210 469 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 468 - -
Accr1g00210 469 MobiDBLite consensus disorder prediction 218 317 - -
Accr1g00210 469 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 381 469 IPR001179 GO:0003755
Accr1g00210 469 SUPERFAMILY FKBP-like 309 468 - -
Accr1g00210 469 MobiDBLite consensus disorder prediction 157 182 - -
Accr1g00210 469 PIRSF FK506-bp_FPR3 202 469 IPR023566 GO:0003755
Accr1g00210 469 PIRSF FK506-bp_FPR3 1 53 IPR023566 GO:0003755
Accr1g00210 469 PIRSF FK506-bp_FPR3 50 193 IPR023566 GO:0003755
Accr1g00210 469 MobiDBLite consensus disorder prediction 157 354 - -
Accr1g00210 469 Pfam Nucleoplasmin-like domain 3 94 IPR041232 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00210 Accr-Chr1 3825631 3830892 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00210 381 469 Calmodulin-binding Proteins AT5G48570 48.889 8.80e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00210 K14826 - gmx:100792856 573.548