Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00209 ATGGAGGAAAAGGAGAGTTTTGGTTCTGGGCTTGTGCTGAAAGATAACGATGCCCAGGACAGCTTCCACGTAGCTTCGAGGAATGAAAACTCCGGTCTGTTCGCTGGAGGGACTGAAGTGGCGGCTCCGGCACCTGTAAGTGCTCCAGCGACGGTGGCTGGGACGCATAGTCCAGGTACGAATGTTAAGAAGAAGAGAGGGAGGCCAAGGAAGTATGGTCCCGATGGCTCAATGGCGTTGGCTTTGTCTCCGATGCCGATTTCATCATCAATTCCGTTGACCGGTGACTTCTCCGGATGGAAGCGGGGCAGAGGGCGGTCTGTTGAATCCATGAAGAAGACGTATAATAAGAATGAATACGAAAGTTCAGGACCAGGTAATGGACTTGCATATTCAGTTGGTGCCAATTTTACACCCCATATACTCACAGTTAATGCTGGCGAGGACGTCAACATGAAGGTTATGTCCTTCTCTCAACAAGGATCCCGCGCTATTTGCATTCTTTCTGCAAATGGCATGATTTCAAATGTAACACTTCGACAACCAACTTCCTCTGGCGGTACTTTAACTTATGATGGACGATTTGAGATTCTTTCTTTGTCTGGCTCATATATGCCAACTGAGAACGGAGGGACAAGGAGCAGATCTGGTGGAATGAGTGTGTCTTTGGCAGGTCCAGATGGTCGAGTCGTTGGGGGTGGACTTGCTGGTCTGTTGGTTGCTGCGGGCCCTGTGCAGGTTGTTGTGGGCAGTTTCCTTCCAGGTCACCAGCAAGAACACAAACACAAGAAGCAGAAGATGGACAATGTTCAAGGCTCGAGGGACTCGTCTACCGATGACAGATCGCCCTTGCCCGAAAAGGAGTCCAATATCAGCCTCTCAAATGTTGGGATTCCGGCTTAA 903 0.4983 MEEKESFGSGLVLKDNDAQDSFHVASRNENSGLFAGGTEVAAPAPVSAPATVAGTHSPGTNVKKKRGRPRKYGPDGSMALALSPMPISSSIPLTGDFSGWKRGRGRSVESMKKTYNKNEYESSGPGNGLAYSVGANFTPHILTVNAGEDVNMKVMSFSQQGSRAICILSANGMISNVTLRQPTSSGGTLTYDGRFEILSLSGSYMPTENGGTRSRSGGMSVSLAGPDGRVVGGGLAGLLVAAGPVQVVVGSFLPGHQQEHKHKKQKMDNVQGSRDSSTDDRSPLPEKESNISLSNVGIPA 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00209 300 MobiDBLite consensus disorder prediction 48 77 - -
Accr1g00209 300 Pfam Plants and Prokaryotes Conserved (PCC) domain 139 252 IPR005175 -
Accr1g00209 300 MobiDBLite consensus disorder prediction 256 286 - -
Accr1g00209 300 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 263 - -
Accr1g00209 300 ProSiteProfiles PPC domain profile profile. 134 274 IPR005175 -
Accr1g00209 300 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 45 276 IPR039605 GO:0003680
Accr1g00209 300 MobiDBLite consensus disorder prediction 256 300 - -
Accr1g00209 300 CDD DUF296 138 252 IPR005175 -
Accr1g00209 300 Gene3D - 139 274 - -
Accr1g00209 300 FunFam AT-hook motif nuclear-localized protein 1-like 139 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00209 Accr-Chr1 3821448 3824218 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00209 62 300 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 59.109 2.11e-92 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00209 - - pcin:129313186 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g00209 1 3821448 3824218 Accr2g01203 2 40319831 40323592 CCT
Accr1g00209 1 3821448 3824218 Accr2g01203 2 40319831 40323592 ECH
Accr1g00209 1 3821448 3824218 Accr1g00209 1 3821448 3824218 ECH