Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00208 ATGGAGGAAAAGGAGAGTTTTGGTTCTGGGCTTGTGCTGAAAGATAACGATGCCCAGGACAGCTTCCACGTAGCTTCGAGGAATGAAAACTCCGGTCTGTTCGCTGGAGGGACTGAAGTGGCGGCTCCGGCACCTGTAAGTGCTCCAGCGACGGTGGCTGGGACGCATAGTCCAGGTACGAATGTTAAGAAGAAGAGAGGGAGGCCAAGGAAGTATGGTCCCGATGGCTCAATGGCGTTGGCTTTGTCTCCGATGCCGATTTCATCATCAATTCCGTTGACCGGTGACTTCTCCGGATGGAAGCGGGGCAGAGGGCGGTCTGTTGAATCCATGAAGAAGACGTATAATAAGAATGAATACGAAAGTTCAGGACCAGGTAATGGACTTGCATATTCAGTTGGTGCCAATTTTACACCCCATATACTCACAGTTAATGCTGGCGAGGACGTCAACATGAAGGTTATGTCCTTCTCTCAACAAGGATCCCGCGCTATTTGCATTCTTTCTGCAAATGGCATGATTTCAAATGTAACACTTCGACAACCAACTTCCTCTGGCGGTACTTTAACTTATGATGGACGATTTGAGATTCTTTCTTTGTCTGGCTCATATATGCCAACTGAGAACGGAGGGACAAGGAGCAGATCTGGTGGAATGAGTGTGTCTTTGGCAGGTCCAGATGGTCGAGTCGTTGGGGGTGGACTTGCTGGTCTGTTGGTTGCTGCGGGCCCTGTGCAGGTTGTTGTGGGCAGTTTCCTTCCAGGTCACCAGCAAGAACACAAACACAAGAAGCAGAAGATGGAGTATGTATCTACTGTGACGCCTACCCATTTTAGTCCTGTCTCTGATCAAGAAATGCATGTTAGTTTCGGAGGGGTAAAGCCTATTCTAACACCTGCTGCTTGTTTTAGCAATGTTCAAGGCTCGAGGGACTCGTCTACCGATGACAGATCGCCCTTGCCCGAAAAGGAGTCCAATATCAGCCTCTCAAATGTTGGGATTCCGGCTTAA 1011 0.4906 MEEKESFGSGLVLKDNDAQDSFHVASRNENSGLFAGGTEVAAPAPVSAPATVAGTHSPGTNVKKKRGRPRKYGPDGSMALALSPMPISSSIPLTGDFSGWKRGRGRSVESMKKTYNKNEYESSGPGNGLAYSVGANFTPHILTVNAGEDVNMKVMSFSQQGSRAICILSANGMISNVTLRQPTSSGGTLTYDGRFEILSLSGSYMPTENGGTRSRSGGMSVSLAGPDGRVVGGGLAGLLVAAGPVQVVVGSFLPGHQQEHKHKKQKMEYVSTVTPTHFSPVSDQEMHVSFGGVKPILTPAACFSNVQGSRDSSTDDRSPLPEKESNISLSNVGIPA 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00208 336 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 45 315 IPR039605 GO:0003680
Accr1g00208 336 MobiDBLite consensus disorder prediction 48 77 - -
Accr1g00208 336 MobiDBLite consensus disorder prediction 305 336 - -
Accr1g00208 336 Gene3D - 139 292 - -
Accr1g00208 336 Pfam Plants and Prokaryotes Conserved (PCC) domain 139 252 IPR005175 -
Accr1g00208 336 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 262 - -
Accr1g00208 336 ProSiteProfiles PPC domain profile profile. 134 274 IPR005175 -
Accr1g00208 336 CDD DUF296 138 252 IPR005175 -
Accr1g00208 336 FunFam AT-hook motif nuclear-localized protein 1-like 139 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00208 Accr-Chr1 3821448 3824218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00208 62 300 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 58.468 1.21e-91 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00208 - - pcin:129313186 392.889