Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00197 ATGGAAGATGGGTTTGTGCTGTTCTGTTTGCATAAGCAGAAAAAGAAGCATCTTTTTGTAGCAATGGCATTTCTCTTTCTCTTTTATCCATTTGCCTCCTCCATTAGCCAAGAAGGACAAGCATTGATGGAGATTAAAGCTTCCTTCAGCAACATAGCAGATGTTTTGCTTGACTGGGATGACTCGCACAATGATGACTTCTGTTCATGGCGTGGCGTTTACTGTGATAATTTAACCCTTACTGTGCTTACTCTGAATCTGTCAAGTTTGAATCTGGGTGGGGAGATATCACCAGCTATTGGCGACTTGAGAAACTTGCAATCCATTGATCTGCAGGGAAATCAGCTGACTGGTCAGATCCCAGATGAACTTGGGGACTGCGCTGCACTTATTCATCTGGATTTGTCTGATAATCAGCTGAATGGTGACATACCCTTCTCAATATCAAAGCTGAAGCAACTTGAGTTTTTGAATCTGAAGAACAATCAGTTGAGAGGTCCTATTCCTTCAACCTTGACCCAAATTCCAAACCTGAAGACTCTTGATCTTGCTCGCAACCAGCTCACTGGTGAGATACCAAGACTCCTCTATTGGAATGAAGTCTTGCAATACCTAGGGTTGAGAGGAAACATGTTGAGTGGAACTCTATCCCCAGATATATGTCAATTAAGTGGACTCTGGTATTTTGATGTGAGAGGCAACAACTTGACGGGCACAATACCTGAAACCATTGGGAACTGTACAAGCTTTCAAATTCTGGATATATCATATAACCAGATTACTGGAGAGATCCCCTATAATATTGGGTTTCTGCAAGTGGCTACTTTGTCACTTCAAGGAAACAGACTAACTGGAAGGATTCCAGAAGTGATTGGTTTCATGCAAGCCCTTGCTATTTTGGACTTGAGTGAGAATGAATTGGTGGGGCCTATCCCTCATGTACTTGGCAATTTATCTTTCACAGGCAAGCTGTATCTCCATGGGAACAAGCTCACTGGTTCAATACCTCCTGAACTTGGTAACATGTCCAAGCTGAGCTACCTGCAATTGAATGGCAACAAACTAGTTGGCAGAATTCCTGAGGAACTTGGAAAGCTTGAGCATTTGTTTGAATTGAATCTTGCTAACAATTATCTTGAAGGATTTATTCCACGTAACATAAGCTCCTGTACTGCCTTGAATAAGTTTAATGTGCACGCTAATCGCTTAAGTGGTTCTATTCCTTTGAGCTTCCGCAGCCTTGGGAGTCTGACCTACTTAAATCTCTCAGAAAACAACTTCAAAGGGAAGATACCAATTGAGTTGGGCCACATCATAAATCTTGATACACTGGATATATCTCACAACAATTTTTCAGGGCAGGTTCCAGCATCTGTTGGTTATCTGGAACATCTTCTGACACTTAACTTGAGCCATAACCATTTTACTGGTCCCTTGCCTGCTGAGTTTGGGAATCTGAAAAGCATCCAGATTATTGATATGTCGTTCAACAATCTATCTGGTAGCGTTCCTTCTGAAATTGGGATGCTGCAGAACCTCGTTTCACTGATTCTAAACAACAATGAATTGCATGGCAAGATTCCTGACCAGTTAACTAACTGCTTCAGTCTCTCCTCATTGAATGTCTCGTACAACAACTTGTCTGGAACAATTCCTCCTATGAGGAACTTCTCACGATTTTCATCTGACAGCTTCATTGGAAATCCCATGTTATGTGGAAATTGGTTAGGATCAATATGTGATCCTTACATAGCAAAATCCAATGCAACTTTTTCCAGGGCTGCAATTGTTTGTCTCACTCTTGGGATCCTCACATTGTTGGCCATGGTAATAGTTGCTATGTACAGATTGAGCCAATCAATGCAATTGATGAAGAGATCCAGAGGAAATGGGCAAGGCATGGGTAAATGTTCGCCTAAACTTGTCGTTCTTCATATGGATATGGCCATGCACACCTATGATGATATAATGGGAAGTACAGAGAATCTAAGTGAGAAGTATATCATAGGATATGGCGGTTCTAGTACGGTGTACAAGTGTGTTTTGAAGAATTCTCGACCGATTGCGATCAAGCGATTATACAACCAGCATCCCAACAACAAAAGGGAGTTTGAAACAGAACTCGAAACCGTTGGCAGCATCAGACATAGAAACCTTGTCACCTTGCATGGTTATGCACTATCTCCAAACGGAAACCTGCTTTTCTATGACTACATGGAGAATGGCTCTCTCTGGGATCTTCTTCATGGTCCCTCAAAGAAGGTAAAACTTGACTGGGAAACACGTTTAAGGATTGCAGTGGGAGCTGCTGAGGGACTTGCTTACCTCCACCATGGCTGCAACCCTAGAATTATTCACAGGGACATCAAGTCTTCAAATATTCTTCTGGATGAGAACTTTGAAGCTCATCTCTCTGACTTTGGCATTGCCAAATGTATCTCAACCACTATAACTCATGCATCAACACATGTTCTTGGAACAATAGGCTATATTGACCCTGAGTATGCCCGTACATCTCGCCTGAATGAGAAATCCGATGTTTACAGCTTTGGCATAGTTCTACTTGAGCTGCTCACCGGGAAGAAAGCAGTGCACAACGAGTCTAACTTGCATCATTTGATACTGTCCAAGACAGATAATGACACTGTAATGGAGGCTGTAGATCCTGAAGTTTCTGTGACCTGCATAAATCAAGCCCATGTGAGGAAGACCTTTCAGCTTGCACTGCTTTGCACAAAAAGAAATCCATTAGAGAGGCCTACCATGCATGAGGTTGCCAAGGTTTTGGTCTCACTTCTCCCTGCACCTCCCAGCAAGACATTTGCCTCAGCTGCAAAGACCATTGACTACGCCCGATTTGTGATCGAAAAGGGGCAACAAGGCGGCCCGAAGAAGGAACTGATACAACAATCTCAACAACTACAGAATAATTCTTGTGATGCTCAATGGTTCATTCGGTTTGGTGATGCTATCTCCAAGAACACCCTCTAA 2991 0.4256 MEDGFVLFCLHKQKKKHLFVAMAFLFLFYPFASSISQEGQALMEIKASFSNIADVLLDWDDSHNDDFCSWRGVYCDNLTLTVLTLNLSSLNLGGEISPAIGDLRNLQSIDLQGNQLTGQIPDELGDCAALIHLDLSDNQLNGDIPFSISKLKQLEFLNLKNNQLRGPIPSTLTQIPNLKTLDLARNQLTGEIPRLLYWNEVLQYLGLRGNMLSGTLSPDICQLSGLWYFDVRGNNLTGTIPETIGNCTSFQILDISYNQITGEIPYNIGFLQVATLSLQGNRLTGRIPEVIGFMQALAILDLSENELVGPIPHVLGNLSFTGKLYLHGNKLTGSIPPELGNMSKLSYLQLNGNKLVGRIPEELGKLEHLFELNLANNYLEGFIPRNISSCTALNKFNVHANRLSGSIPLSFRSLGSLTYLNLSENNFKGKIPIELGHIINLDTLDISHNNFSGQVPASVGYLEHLLTLNLSHNHFTGPLPAEFGNLKSIQIIDMSFNNLSGSVPSEIGMLQNLVSLILNNNELHGKIPDQLTNCFSLSSLNVSYNNLSGTIPPMRNFSRFSSDSFIGNPMLCGNWLGSICDPYIAKSNATFSRAAIVCLTLGILTLLAMVIVAMYRLSQSMQLMKRSRGNGQGMGKCSPKLVVLHMDMAMHTYDDIMGSTENLSEKYIIGYGGSSTVYKCVLKNSRPIAIKRLYNQHPNNKREFETELETVGSIRHRNLVTLHGYALSPNGNLLFYDYMENGSLWDLLHGPSKKVKLDWETRLRIAVGAAEGLAYLHHGCNPRIIHRDIKSSNILLDENFEAHLSDFGIAKCISTTITHASTHVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVHNESNLHHLILSKTDNDTVMEAVDPEVSVTCINQAHVRKTFQLALLCTKRNPLERPTMHEVAKVLVSLLPAPPSKTFASAAKTIDYARFVIEKGQQGGPKKELIQQSQQLQNNSCDAQWFIRFGDAISKNTL 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00197 996 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 739 940 - -
Accr1g00197 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Accr1g00197 996 SUPERFAMILY L domain-like 316 573 - -
Accr1g00197 996 Gene3D Ribonuclease Inhibitor 198 303 IPR032675 -
Accr1g00197 996 SUPERFAMILY Protein kinase-like (PK-like) 645 929 IPR011009 -
Accr1g00197 996 Gene3D Transferase(Phosphotransferase) domain 1 739 944 - -
Accr1g00197 996 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 310 583 - -
Accr1g00197 996 SUPERFAMILY L domain-like 35 333 - -
Accr1g00197 996 Pfam Leucine Rich repeat 246 263 IPR001611 GO:0005515
Accr1g00197 996 Pfam Leucine Rich repeat 176 191 IPR001611 GO:0005515
Accr1g00197 996 Gene3D Ribonuclease Inhibitor 35 197 IPR032675 -
Accr1g00197 996 SMART serkin_6 663 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00197 996 ProSitePatterns Protein kinases ATP-binding region signature. 669 691 IPR017441 GO:0005524
Accr1g00197 996 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 634 738 - -
Accr1g00197 996 Pfam Leucine rich repeat 104 164 IPR001611 GO:0005515
Accr1g00197 996 Pfam Leucine rich repeat 440 499 IPR001611 GO:0005515
Accr1g00197 996 ProSiteProfiles Protein kinase domain profile. 663 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00197 996 Gene3D Ribonuclease Inhibitor 304 583 IPR032675 -
Accr1g00197 996 ProSiteProfiles Leucine-rich repeat profile. 177 199 IPR001611 GO:0005515
Accr1g00197 996 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 35 199 - -
Accr1g00197 996 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 200 309 - -
Accr1g00197 996 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 323 930 - -
Accr1g00197 996 SMART LRR_typ_2 175 199 IPR003591 -
Accr1g00197 996 SMART LRR_typ_2 414 438 IPR003591 -
Accr1g00197 996 SMART LRR_typ_2 462 485 IPR003591 -
Accr1g00197 996 SMART LRR_typ_2 103 127 IPR003591 -
Accr1g00197 996 SMART LRR_typ_2 342 365 IPR003591 -
Accr1g00197 996 SMART LRR_typ_2 366 390 IPR003591 -
Accr1g00197 996 SMART LRR_typ_2 510 534 IPR003591 -
Accr1g00197 996 SMART LRR_typ_2 151 174 IPR003591 -
Accr1g00197 996 SMART LRR_typ_2 294 322 IPR003591 -
Accr1g00197 996 SMART LRR_typ_2 223 247 IPR003591 -
Accr1g00197 996 Gene3D Phosphorylase Kinase; domain 1 632 738 - -
Accr1g00197 996 Pfam Protein kinase domain 666 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00197 996 Pfam Leucine Rich Repeat 368 390 IPR001611 GO:0005515
Accr1g00197 996 Pfam Leucine rich repeat N-terminal domain 36 76 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00197 Accr-Chr1 3694020 3703367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00197 105 996 Receptor kinase-like Gene Family AT5G07180 74.776 0.0 1344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Accr1g00197 Pkinase 3.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00197 K20718 - cave:132182704 1597.79